Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP9XQ93008 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP9XQ93008 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP9XQ93008 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP9XQ93008 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
USP9XQ93008 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.13■□□□□ 0.97
USP9XQ93008 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP9XQ93008 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
USP9XQ93008 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP9XQ93008 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP9XQ93008 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.13■□□□□ 0.97
USP9XQ93008 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP9XQ93008 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.12■□□□□ 0.97
USP9XQ93008 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
USP9XQ93008 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
USP9XQ93008 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
USP9XQ93008 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP9XQ93008 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP9XQ93008 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP9XQ93008 RARRES2P11-201ENST00000635158 484 ntBASIC21.11■□□□□ 0.97
USP9XQ93008 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.1■□□□□ 0.97
USP9XQ93008 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
USP9XQ93008 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.1■□□□□ 0.97
USP9XQ93008 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.1■□□□□ 0.97
USP9XQ93008 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP9XQ93008 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP9XQ93008 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP9XQ93008 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.1■□□□□ 0.97
USP9XQ93008 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
USP9XQ93008 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.09■□□□□ 0.97
USP9XQ93008 AP001330.3-201ENST00000520123 633 ntBASIC21.09■□□□□ 0.97
USP9XQ93008 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP9XQ93008 AL136967.2-201ENST00000623968 743 ntBASIC21.09■□□□□ 0.97
USP9XQ93008 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP9XQ93008 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.09■□□□□ 0.97
USP9XQ93008 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP9XQ93008 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP9XQ93008 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.08■□□□□ 0.97
USP9XQ93008 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP9XQ93008 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.08■□□□□ 0.97
USP9XQ93008 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.08■□□□□ 0.97
USP9XQ93008 AL136162.1-201ENST00000607711 1078 ntBASIC21.08■□□□□ 0.97
USP9XQ93008 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
USP9XQ93008 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP9XQ93008 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP9XQ93008 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP9XQ93008 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP9XQ93008 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP9XQ93008 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.07■□□□□ 0.96
USP9XQ93008 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
USP9XQ93008 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.06■□□□□ 0.96
USP9XQ93008 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.06■□□□□ 0.96
USP9XQ93008 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
USP9XQ93008 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.06■□□□□ 0.96
USP9XQ93008 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP9XQ93008 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP9XQ93008 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.05■□□□□ 0.96
USP9XQ93008 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
USP9XQ93008 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP9XQ93008 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.05■□□□□ 0.96
USP9XQ93008 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.05■□□□□ 0.96
USP9XQ93008 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP9XQ93008 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP9XQ93008 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.04■□□□□ 0.96
USP9XQ93008 RASA4CP-201ENST00000424092 1398 ntBASIC21.04■□□□□ 0.96
USP9XQ93008 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP9XQ93008 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP9XQ93008 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP9XQ93008 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP9XQ93008 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP9XQ93008 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.03■□□□□ 0.96
USP9XQ93008 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP9XQ93008 AF131216.4-201ENST00000638924 1588 ntBASIC21.03■□□□□ 0.96
USP9XQ93008 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
USP9XQ93008 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.02■□□□□ 0.96
USP9XQ93008 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP9XQ93008 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP9XQ93008 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP9XQ93008 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP9XQ93008 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP9XQ93008 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.02■□□□□ 0.96
USP9XQ93008 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.02■□□□□ 0.96
USP9XQ93008 AC091305.1-201ENST00000479476 895 ntBASIC21.01■□□□□ 0.95
USP9XQ93008 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.01■□□□□ 0.95
USP9XQ93008 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.01■□□□□ 0.95
USP9XQ93008 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.01■□□□□ 0.95
USP9XQ93008 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
USP9XQ93008 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP9XQ93008 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21■□□□□ 0.95
USP9XQ93008 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
USP9XQ93008 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP9XQ93008 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21■□□□□ 0.95
USP9XQ93008 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms