Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
RAPGEF4Q8WZA2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RAPGEF4Q8WZA2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
RAPGEF4Q8WZA2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.53■■■□□ 2.64
RAPGEF4Q8WZA2 AC011551.1-201ENST00000614101 683 ntBASIC31.53■■■□□ 2.64
RAPGEF4Q8WZA2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.53■■■□□ 2.64
RAPGEF4Q8WZA2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RAPGEF4Q8WZA2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
RAPGEF4Q8WZA2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.51■■■□□ 2.64
RAPGEF4Q8WZA2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 AC131281.2-201ENST00000520478 145 ntBASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
RAPGEF4Q8WZA2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RAPGEF4Q8WZA2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
RAPGEF4Q8WZA2 AC010997.5-201ENST00000609182 354 ntBASIC31.5■■■□□ 2.63
RAPGEF4Q8WZA2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.49■■■□□ 2.63
RAPGEF4Q8WZA2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.49■■■□□ 2.63
RAPGEF4Q8WZA2 MIR935-201ENST00000401179 91 ntBASIC31.49■■■□□ 2.63
RAPGEF4Q8WZA2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.49■■■□□ 2.63
RAPGEF4Q8WZA2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC31.49■■■□□ 2.63
RAPGEF4Q8WZA2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
RAPGEF4Q8WZA2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
RAPGEF4Q8WZA2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAPGEF4Q8WZA2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.47■■■□□ 2.63
RAPGEF4Q8WZA2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.47■■■□□ 2.63
RAPGEF4Q8WZA2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.47■■■□□ 2.63
RAPGEF4Q8WZA2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RAPGEF4Q8WZA2 MIR638-201ENST00000385237 100 ntBASIC31.46■■■□□ 2.63
RAPGEF4Q8WZA2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
RAPGEF4Q8WZA2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC31.46■■■□□ 2.63
RAPGEF4Q8WZA2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.46■■■□□ 2.63
RAPGEF4Q8WZA2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.46■■■□□ 2.63
RAPGEF4Q8WZA2 AL117332.1-201ENST00000622628 974 ntBASIC31.46■■■□□ 2.63
RAPGEF4Q8WZA2 MTDHP2-201ENST00000601468 714 ntBASIC31.45■■■□□ 2.63
RAPGEF4Q8WZA2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
RAPGEF4Q8WZA2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.45■■■□□ 2.62
RAPGEF4Q8WZA2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 AC142086.6-201ENST00000621154 1765 ntBASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 MIR6724-1-201ENST00000616420 92 ntBASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 MIR6724-2-201ENST00000616483 92 ntBASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 MIR6724-4-201ENST00000617390 92 ntBASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 MIR6724-3-201ENST00000622482 92 ntBASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RAPGEF4Q8WZA2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.43■■■□□ 2.62
RAPGEF4Q8WZA2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RAPGEF4Q8WZA2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.43■■■□□ 2.62
RAPGEF4Q8WZA2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RAPGEF4Q8WZA2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 AL136116.3-201ENST00000402907 1138 ntBASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 MIR3621-201ENST00000580529 85 ntBASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 AL139246.5-201ENST00000606645 996 ntBASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.42■■■□□ 2.62
RAPGEF4Q8WZA2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.41■■■□□ 2.62
RAPGEF4Q8WZA2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
RAPGEF4Q8WZA2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RAPGEF4Q8WZA2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RAPGEF4Q8WZA2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.39■■■□□ 2.62
RAPGEF4Q8WZA2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.61
RAPGEF4Q8WZA2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
RAPGEF4Q8WZA2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.38■■■□□ 2.61
RAPGEF4Q8WZA2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAPGEF4Q8WZA2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RAPGEF4Q8WZA2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms