Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC37.55■■■■□ 3.6
CASKIN1Q8WXD9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC37.55■■■■□ 3.6
CASKIN1Q8WXD9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
CASKIN1Q8WXD9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
CASKIN1Q8WXD9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC37.54■■■■□ 3.6
CASKIN1Q8WXD9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC37.54■■■■□ 3.6
CASKIN1Q8WXD9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
CASKIN1Q8WXD9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC37.53■■■■□ 3.6
CASKIN1Q8WXD9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC37.52■■■■□ 3.6
CASKIN1Q8WXD9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
CASKIN1Q8WXD9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC37.52■■■■□ 3.6
CASKIN1Q8WXD9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC37.52■■■■□ 3.6
CASKIN1Q8WXD9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
CASKIN1Q8WXD9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC37.51■■■■□ 3.59
CASKIN1Q8WXD9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC37.51■■■■□ 3.59
CASKIN1Q8WXD9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC37.5■■■■□ 3.59
CASKIN1Q8WXD9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
CASKIN1Q8WXD9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC37.5■■■■□ 3.59
CASKIN1Q8WXD9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC37.5■■■■□ 3.59
CASKIN1Q8WXD9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC37.5■■■■□ 3.59
CASKIN1Q8WXD9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC37.49■■■■□ 3.59
CASKIN1Q8WXD9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
CASKIN1Q8WXD9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
CASKIN1Q8WXD9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
CASKIN1Q8WXD9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC37.48■■■■□ 3.59
CASKIN1Q8WXD9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
CASKIN1Q8WXD9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC37.47■■■■□ 3.59
CASKIN1Q8WXD9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
CASKIN1Q8WXD9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC37.47■■■■□ 3.59
CASKIN1Q8WXD9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
CASKIN1Q8WXD9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC37.47■■■■□ 3.59
CASKIN1Q8WXD9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC37.46■■■■□ 3.59
CASKIN1Q8WXD9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC37.46■■■■□ 3.59
CASKIN1Q8WXD9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC37.45■■■■□ 3.59
CASKIN1Q8WXD9 KRT16P3-201ENST00000439127 1283 ntBASIC37.45■■■■□ 3.59
CASKIN1Q8WXD9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC37.45■■■■□ 3.59
CASKIN1Q8WXD9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC37.45■■■■□ 3.59
CASKIN1Q8WXD9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
CASKIN1Q8WXD9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC37.45■■■■□ 3.59
CASKIN1Q8WXD9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC37.45■■■■□ 3.59
CASKIN1Q8WXD9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC37.44■■■■□ 3.58
CASKIN1Q8WXD9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC37.44■■■■□ 3.58
CASKIN1Q8WXD9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CASKIN1Q8WXD9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC37.44■■■■□ 3.58
CASKIN1Q8WXD9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CASKIN1Q8WXD9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CASKIN1Q8WXD9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CASKIN1Q8WXD9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC37.43■■■■□ 3.58
CASKIN1Q8WXD9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
CASKIN1Q8WXD9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC37.43■■■■□ 3.58
CASKIN1Q8WXD9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC37.42■■■■□ 3.58
CASKIN1Q8WXD9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
CASKIN1Q8WXD9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
CASKIN1Q8WXD9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC37.42■■■■□ 3.58
CASKIN1Q8WXD9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC37.42■■■■□ 3.58
CASKIN1Q8WXD9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC37.41■■■■□ 3.58
CASKIN1Q8WXD9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
CASKIN1Q8WXD9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC37.41■■■■□ 3.58
CASKIN1Q8WXD9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
CASKIN1Q8WXD9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC37.4■■■■□ 3.58
CASKIN1Q8WXD9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC37.4■■■■□ 3.58
CASKIN1Q8WXD9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC37.4■■■■□ 3.58
CASKIN1Q8WXD9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC37.4■■■■□ 3.58
CASKIN1Q8WXD9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
CASKIN1Q8WXD9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
CASKIN1Q8WXD9 AC092028.1-203ENST00000608262 953 ntBASIC37.39■■■■□ 3.58
CASKIN1Q8WXD9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC37.39■■■■□ 3.58
CASKIN1Q8WXD9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC37.38■■■■□ 3.57
CASKIN1Q8WXD9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC37.38■■■■□ 3.57
CASKIN1Q8WXD9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC37.38■■■■□ 3.57
CASKIN1Q8WXD9 GAK-223ENST00000628912 497 ntTSL 5 BASIC37.38■■■■□ 3.57
CASKIN1Q8WXD9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
CASKIN1Q8WXD9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
CASKIN1Q8WXD9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC37.37■■■■□ 3.57
CASKIN1Q8WXD9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC37.37■■■■□ 3.57
CASKIN1Q8WXD9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC37.37■■■■□ 3.57
CASKIN1Q8WXD9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
CASKIN1Q8WXD9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC37.37■■■■□ 3.57
CASKIN1Q8WXD9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CASKIN1Q8WXD9 AC096887.2-201ENST00000623443 1957 ntBASIC37.36■■■■□ 3.57
CASKIN1Q8WXD9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC37.36■■■■□ 3.57
CASKIN1Q8WXD9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
CASKIN1Q8WXD9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
CASKIN1Q8WXD9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CASKIN1Q8WXD9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC37.35■■■■□ 3.57
CASKIN1Q8WXD9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
CASKIN1Q8WXD9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC37.34■■■■□ 3.57
CASKIN1Q8WXD9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
CASKIN1Q8WXD9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC37.34■■■■□ 3.57
CASKIN1Q8WXD9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CASKIN1Q8WXD9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC37.33■■■■□ 3.57
CASKIN1Q8WXD9 TSPY9P-201ENST00000440215 945 ntBASIC37.33■■■■□ 3.57
CASKIN1Q8WXD9 TSPY11P-201ENST00000442607 1045 ntBASIC37.33■■■■□ 3.57
CASKIN1Q8WXD9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.57
CASKIN1Q8WXD9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC37.32■■■■□ 3.56
CASKIN1Q8WXD9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
CASKIN1Q8WXD9 AF131216.4-201ENST00000638924 1588 ntBASIC37.3■■■■□ 3.56
CASKIN1Q8WXD9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC37.3■■■■□ 3.56
CASKIN1Q8WXD9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC37.3■■■■□ 3.56
CASKIN1Q8WXD9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC37.3■■■■□ 3.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms