Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
MBD3L1Q8WWY6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MBD3L1Q8WWY6 AC004812.2-201ENST00000611079 2094 ntBASIC18.64■□□□□ 0.57
MBD3L1Q8WWY6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3L1Q8WWY6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3L1Q8WWY6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3L1Q8WWY6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3L1Q8WWY6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.63■□□□□ 0.57
MBD3L1Q8WWY6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MBD3L1Q8WWY6 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.63■□□□□ 0.57
MBD3L1Q8WWY6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3L1Q8WWY6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD3L1Q8WWY6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD3L1Q8WWY6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.61■□□□□ 0.57
MBD3L1Q8WWY6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD3L1Q8WWY6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD3L1Q8WWY6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD3L1Q8WWY6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MBD3L1Q8WWY6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MBD3L1Q8WWY6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MBD3L1Q8WWY6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MBD3L1Q8WWY6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MBD3L1Q8WWY6 C9orf163-202ENST00000624034 2573 ntBASIC18.59■□□□□ 0.57
MBD3L1Q8WWY6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MBD3L1Q8WWY6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
MBD3L1Q8WWY6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
MBD3L1Q8WWY6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MBD3L1Q8WWY6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
MBD3L1Q8WWY6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
MBD3L1Q8WWY6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L1Q8WWY6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L1Q8WWY6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L1Q8WWY6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
MBD3L1Q8WWY6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MBD3L1Q8WWY6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MBD3L1Q8WWY6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
MBD3L1Q8WWY6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L1Q8WWY6 ABCB10P4-201ENST00000566803 2184 ntBASIC18.54■□□□□ 0.56
MBD3L1Q8WWY6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD3L1Q8WWY6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L1Q8WWY6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD3L1Q8WWY6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L1Q8WWY6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L1Q8WWY6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MBD3L1Q8WWY6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.52■□□□□ 0.56
MBD3L1Q8WWY6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms