Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF139Q8WU17 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF139Q8WU17 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF139Q8WU17 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF139Q8WU17 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF139Q8WU17 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
RNF139Q8WU17 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF139Q8WU17 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF139Q8WU17 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
RNF139Q8WU17 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF139Q8WU17 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF139Q8WU17 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.92■■□□□ 1.58
RNF139Q8WU17 LONRF2P2-201ENST00000439212 571 ntBASIC24.92■■□□□ 1.58
RNF139Q8WU17 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.92■■□□□ 1.58
RNF139Q8WU17 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF139Q8WU17 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF139Q8WU17 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF139Q8WU17 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF139Q8WU17 AC019171.1-201ENST00000601251 1056 ntBASIC24.91■■□□□ 1.58
RNF139Q8WU17 PVT1_1.1-201ENST00000615125 194 ntBASIC24.91■■□□□ 1.58
RNF139Q8WU17 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.9■■□□□ 1.58
RNF139Q8WU17 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF139Q8WU17 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF139Q8WU17 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RNF139Q8WU17 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RNF139Q8WU17 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF139Q8WU17 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RNF139Q8WU17 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF139Q8WU17 KRT8P33-201ENST00000508125 1423 ntBASIC24.89■■□□□ 1.58
RNF139Q8WU17 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF139Q8WU17 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.89■■□□□ 1.58
RNF139Q8WU17 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.89■■□□□ 1.58
RNF139Q8WU17 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF139Q8WU17 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF139Q8WU17 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.88■■□□□ 1.57
RNF139Q8WU17 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF139Q8WU17 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF139Q8WU17 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.88■■□□□ 1.57
RNF139Q8WU17 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF139Q8WU17 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
RNF139Q8WU17 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF139Q8WU17 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
RNF139Q8WU17 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF139Q8WU17 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF139Q8WU17 YBX1P4-201ENST00000392794 808 ntBASIC24.87■■□□□ 1.57
RNF139Q8WU17 RARRES2P1-201ENST00000474487 481 ntBASIC24.87■■□□□ 1.57
RNF139Q8WU17 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.87■■□□□ 1.57
RNF139Q8WU17 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RNF139Q8WU17 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF139Q8WU17 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF139Q8WU17 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF139Q8WU17 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF139Q8WU17 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF139Q8WU17 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.86■■□□□ 1.57
RNF139Q8WU17 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF139Q8WU17 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF139Q8WU17 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF139Q8WU17 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF139Q8WU17 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF139Q8WU17 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.85■■□□□ 1.57
RNF139Q8WU17 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF139Q8WU17 AC097639.1-201ENST00000565519 1891 ntBASIC24.85■■□□□ 1.57
RNF139Q8WU17 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF139Q8WU17 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF139Q8WU17 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF139Q8WU17 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF139Q8WU17 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
RNF139Q8WU17 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF139Q8WU17 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RNF139Q8WU17 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.83■■□□□ 1.57
RNF139Q8WU17 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF139Q8WU17 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.56
RNF139Q8WU17 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RNF139Q8WU17 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.82■■□□□ 1.56
RNF139Q8WU17 MIR4508-201ENST00000584178 70 ntBASIC24.82■■□□□ 1.56
RNF139Q8WU17 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF139Q8WU17 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
RNF139Q8WU17 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF139Q8WU17 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.82■■□□□ 1.56
RNF139Q8WU17 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RNF139Q8WU17 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
RNF139Q8WU17 AC103834.1-201ENST00000520383 144 ntBASIC24.81■■□□□ 1.56
RNF139Q8WU17 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RNF139Q8WU17 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF139Q8WU17 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF139Q8WU17 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
RNF139Q8WU17 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.8■■□□□ 1.56
RNF139Q8WU17 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF139Q8WU17 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF139Q8WU17 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF139Q8WU17 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.8■■□□□ 1.56
RNF139Q8WU17 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF139Q8WU17 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF139Q8WU17 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF139Q8WU17 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.79■■□□□ 1.56
RNF139Q8WU17 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF139Q8WU17 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF139Q8WU17 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF139Q8WU17 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF139Q8WU17 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms