Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC01003-201ENST00000564834 1764 ntBASIC29.44■■■□□ 2.3
SNED1Q8TER0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
SNED1Q8TER0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SNED1Q8TER0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC29.44■■■□□ 2.3
SNED1Q8TER0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.44■■■□□ 2.3
SNED1Q8TER0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
SNED1Q8TER0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNED1Q8TER0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNED1Q8TER0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SNED1Q8TER0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNED1Q8TER0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNED1Q8TER0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNED1Q8TER0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.42■■■□□ 2.3
SNED1Q8TER0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNED1Q8TER0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.42■■■□□ 2.3
SNED1Q8TER0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.42■■■□□ 2.3
SNED1Q8TER0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.42■■■□□ 2.3
SNED1Q8TER0 AC010997.5-201ENST00000609182 354 ntBASIC29.42■■■□□ 2.3
SNED1Q8TER0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.42■■■□□ 2.3
SNED1Q8TER0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNED1Q8TER0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SNED1Q8TER0 AC142472.1-201ENST00000612013 1741 ntBASIC29.42■■■□□ 2.3
SNED1Q8TER0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.41■■■□□ 2.3
SNED1Q8TER0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNED1Q8TER0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SNED1Q8TER0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.4■■■□□ 2.3
SNED1Q8TER0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNED1Q8TER0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNED1Q8TER0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.4■■■□□ 2.3
SNED1Q8TER0 AC011551.1-201ENST00000614101 683 ntBASIC29.4■■■□□ 2.3
SNED1Q8TER0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SNED1Q8TER0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.4■■■□□ 2.3
SNED1Q8TER0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
SNED1Q8TER0 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.39■■■□□ 2.3
SNED1Q8TER0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.39■■■□□ 2.3
SNED1Q8TER0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SNED1Q8TER0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC29.38■■■□□ 2.29
SNED1Q8TER0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
SNED1Q8TER0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNED1Q8TER0 AC096631.2-201ENST00000436136 790 ntBASIC29.37■■■□□ 2.29
SNED1Q8TER0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNED1Q8TER0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SNED1Q8TER0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SNED1Q8TER0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNED1Q8TER0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SNED1Q8TER0 MTDHP2-201ENST00000601468 714 ntBASIC29.36■■■□□ 2.29
SNED1Q8TER0 AC005837.3-201ENST00000612163 286 ntBASIC29.36■■■□□ 2.29
SNED1Q8TER0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SNED1Q8TER0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SNED1Q8TER0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
SNED1Q8TER0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SNED1Q8TER0 AC133561.4-201ENST00000566112 224 ntBASIC29.34■■■□□ 2.29
SNED1Q8TER0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNED1Q8TER0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SNED1Q8TER0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.33■■■□□ 2.29
SNED1Q8TER0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNED1Q8TER0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
SNED1Q8TER0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNED1Q8TER0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNED1Q8TER0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNED1Q8TER0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.3■■■□□ 2.28
SNED1Q8TER0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.3■■■□□ 2.28
SNED1Q8TER0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNED1Q8TER0 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.3■■■□□ 2.28
SNED1Q8TER0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.3■■■□□ 2.28
SNED1Q8TER0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNED1Q8TER0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNED1Q8TER0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SNED1Q8TER0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.29■■■□□ 2.28
SNED1Q8TER0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SNED1Q8TER0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC29.29■■■□□ 2.28
SNED1Q8TER0 AF131216.4-201ENST00000638924 1588 ntBASIC29.29■■■□□ 2.28
SNED1Q8TER0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
SNED1Q8TER0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SNED1Q8TER0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SNED1Q8TER0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
SNED1Q8TER0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.28■■■□□ 2.28
SNED1Q8TER0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNED1Q8TER0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.28■■■□□ 2.28
SNED1Q8TER0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC29.28■■■□□ 2.28
SNED1Q8TER0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.27■■■□□ 2.28
SNED1Q8TER0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.27■■■□□ 2.28
SNED1Q8TER0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC29.27■■■□□ 2.28
SNED1Q8TER0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.27■■■□□ 2.28
SNED1Q8TER0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
SNED1Q8TER0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SNED1Q8TER0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.28
SNED1Q8TER0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
SNED1Q8TER0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.26■■■□□ 2.27
SNED1Q8TER0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.26■■■□□ 2.27
SNED1Q8TER0 AL356740.2-201ENST00000601559 647 ntBASIC29.26■■■□□ 2.27
SNED1Q8TER0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SNED1Q8TER0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNED1Q8TER0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.24■■■□□ 2.27
SNED1Q8TER0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNED1Q8TER0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.24■■■□□ 2.27
SNED1Q8TER0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SNED1Q8TER0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.24■■■□□ 2.27
SNED1Q8TER0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SNED1Q8TER0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms