Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HMGCLL1Q8TB92 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.32■■□□□ 1.32
HMGCLL1Q8TB92 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HMGCLL1Q8TB92 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
HMGCLL1Q8TB92 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HMGCLL1Q8TB92 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HMGCLL1Q8TB92 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HMGCLL1Q8TB92 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.31■■□□□ 1.32
HMGCLL1Q8TB92 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HMGCLL1Q8TB92 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HMGCLL1Q8TB92 AC129492.7-201ENST00000622992 756 ntBASIC23.31■■□□□ 1.32
HMGCLL1Q8TB92 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
HMGCLL1Q8TB92 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HMGCLL1Q8TB92 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HMGCLL1Q8TB92 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
HMGCLL1Q8TB92 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HMGCLL1Q8TB92 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HMGCLL1Q8TB92 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HMGCLL1Q8TB92 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
HMGCLL1Q8TB92 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
HMGCLL1Q8TB92 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 SPCS2P3-201ENST00000500401 656 ntBASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.29■■□□□ 1.32
HMGCLL1Q8TB92 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 KRT18P10-201ENST00000388836 1287 ntBASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
HMGCLL1Q8TB92 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
HMGCLL1Q8TB92 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HMGCLL1Q8TB92 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.27■■□□□ 1.32
HMGCLL1Q8TB92 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HMGCLL1Q8TB92 DUX4L9-201ENST00000449051 1259 ntBASIC23.27■■□□□ 1.32
HMGCLL1Q8TB92 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.27■■□□□ 1.32
HMGCLL1Q8TB92 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HMGCLL1Q8TB92 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HMGCLL1Q8TB92 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 AC018755.3-202ENST00000596210 929 ntBASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
HMGCLL1Q8TB92 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 MIR6765-201ENST00000614092 87 ntBASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGCLL1Q8TB92 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 AC012354.3-201ENST00000623734 483 ntBASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGCLL1Q8TB92 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.22■■□□□ 1.31
HMGCLL1Q8TB92 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 ATP5G2P3-201ENST00000429083 425 ntBASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.21■■□□□ 1.31
HMGCLL1Q8TB92 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms