Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 AC103724.3-201ENST00000564481 992 ntBASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDND2Q8NHS1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDND2Q8NHS1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDND2Q8NHS1 LONRF2P2-201ENST00000439212 571 ntBASIC20.1■□□□□ 0.81
CLDND2Q8NHS1 AL031848.2-201ENST00000607670 837 ntBASIC20.1■□□□□ 0.81
CLDND2Q8NHS1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDND2Q8NHS1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDND2Q8NHS1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDND2Q8NHS1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDND2Q8NHS1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CLDND2Q8NHS1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDND2Q8NHS1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDND2Q8NHS1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CLDND2Q8NHS1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLDND2Q8NHS1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 KRT18P10-201ENST00000388836 1287 ntBASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDND2Q8NHS1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDND2Q8NHS1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDND2Q8NHS1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDND2Q8NHS1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDND2Q8NHS1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDND2Q8NHS1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDND2Q8NHS1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDND2Q8NHS1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDND2Q8NHS1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 AC145676.1-201ENST00000514988 2004 ntBASIC20.03■□□□□ 0.8
CLDND2Q8NHS1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLDND2Q8NHS1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLDND2Q8NHS1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDND2Q8NHS1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLDND2Q8NHS1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDND2Q8NHS1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDND2Q8NHS1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDND2Q8NHS1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CLDND2Q8NHS1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDND2Q8NHS1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDND2Q8NHS1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDND2Q8NHS1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDND2Q8NHS1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20■□□□□ 0.79
CLDND2Q8NHS1 OR2A1-AS1-204ENST00000470435 602 ntBASIC20■□□□□ 0.79
CLDND2Q8NHS1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLDND2Q8NHS1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CLDND2Q8NHS1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLDND2Q8NHS1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDND2Q8NHS1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms