Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
RTL9Q8NET4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.57■■■□□ 2.32
RTL9Q8NET4 KRT125P-201ENST00000546827 989 ntBASIC29.56■■■□□ 2.32
RTL9Q8NET4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RTL9Q8NET4 MIR4281-201ENST00000580852 62 ntBASIC29.56■■■□□ 2.32
RTL9Q8NET4 AC011551.1-201ENST00000614101 683 ntBASIC29.56■■■□□ 2.32
RTL9Q8NET4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RTL9Q8NET4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTL9Q8NET4 AC021242.3-201ENST00000607598 1377 ntBASIC29.55■■■□□ 2.32
RTL9Q8NET4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
RTL9Q8NET4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.55■■■□□ 2.32
RTL9Q8NET4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTL9Q8NET4 MIR4787-201ENST00000607364 84 ntBASIC29.55■■■□□ 2.32
RTL9Q8NET4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTL9Q8NET4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RTL9Q8NET4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.54■■■□□ 2.32
RTL9Q8NET4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.54■■■□□ 2.32
RTL9Q8NET4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
RTL9Q8NET4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RTL9Q8NET4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RTL9Q8NET4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RTL9Q8NET4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RTL9Q8NET4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
RTL9Q8NET4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.54■■■□□ 2.32
RTL9Q8NET4 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.53■■■□□ 2.32
RTL9Q8NET4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC29.53■■■□□ 2.32
RTL9Q8NET4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
RTL9Q8NET4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RTL9Q8NET4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTL9Q8NET4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.52■■■□□ 2.32
RTL9Q8NET4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
RTL9Q8NET4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RTL9Q8NET4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
RTL9Q8NET4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL9Q8NET4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL9Q8NET4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RTL9Q8NET4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.51■■■□□ 2.31
RTL9Q8NET4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
RTL9Q8NET4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
RTL9Q8NET4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.5■■■□□ 2.31
RTL9Q8NET4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC29.5■■■□□ 2.31
RTL9Q8NET4 UNC93B8-201ENST00000511903 705 ntBASIC29.5■■■□□ 2.31
RTL9Q8NET4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
RTL9Q8NET4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.49■■■□□ 2.31
RTL9Q8NET4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.49■■■□□ 2.31
RTL9Q8NET4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RTL9Q8NET4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RTL9Q8NET4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RTL9Q8NET4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.48■■■□□ 2.31
RTL9Q8NET4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.48■■■□□ 2.31
RTL9Q8NET4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
RTL9Q8NET4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RTL9Q8NET4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.47■■■□□ 2.31
RTL9Q8NET4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.47■■■□□ 2.31
RTL9Q8NET4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.47■■■□□ 2.31
RTL9Q8NET4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.46■■■□□ 2.31
RTL9Q8NET4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RTL9Q8NET4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
RTL9Q8NET4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.46■■■□□ 2.31
RTL9Q8NET4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RTL9Q8NET4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RTL9Q8NET4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
RTL9Q8NET4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RTL9Q8NET4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RTL9Q8NET4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.44■■■□□ 2.3
RTL9Q8NET4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
RTL9Q8NET4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTL9Q8NET4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTL9Q8NET4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTL9Q8NET4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RTL9Q8NET4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC29.43■■■□□ 2.3
RTL9Q8NET4 AC008406.3-201ENST00000620001 1374 ntBASIC29.43■■■□□ 2.3
RTL9Q8NET4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RTL9Q8NET4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RTL9Q8NET4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
RTL9Q8NET4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.42■■■□□ 2.3
RTL9Q8NET4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.42■■■□□ 2.3
RTL9Q8NET4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTL9Q8NET4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.42■■■□□ 2.3
RTL9Q8NET4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
RTL9Q8NET4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RTL9Q8NET4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RTL9Q8NET4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RTL9Q8NET4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
RTL9Q8NET4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.41■■■□□ 2.3
RTL9Q8NET4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.41■■■□□ 2.3
RTL9Q8NET4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.41■■■□□ 2.3
RTL9Q8NET4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.41■■■□□ 2.3
RTL9Q8NET4 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.41■■■□□ 2.3
RTL9Q8NET4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
RTL9Q8NET4 AC096887.2-201ENST00000623443 1957 ntBASIC29.4■■■□□ 2.3
RTL9Q8NET4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RTL9Q8NET4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RTL9Q8NET4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.39■■■□□ 2.3
RTL9Q8NET4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.39■■■□□ 2.3
RTL9Q8NET4 AC092028.1-203ENST00000608262 953 ntBASIC29.39■■■□□ 2.3
RTL9Q8NET4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
RTL9Q8NET4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.39■■■□□ 2.29
RTL9Q8NET4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
RTL9Q8NET4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.39■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms