Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC37.79■■■■□ 3.64
CFAP43Q8NDM7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
CFAP43Q8NDM7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC37.78■■■■□ 3.64
CFAP43Q8NDM7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC37.78■■■■□ 3.64
CFAP43Q8NDM7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC37.78■■■■□ 3.64
CFAP43Q8NDM7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC37.77■■■■□ 3.64
CFAP43Q8NDM7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC37.77■■■■□ 3.64
CFAP43Q8NDM7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC37.77■■■■□ 3.64
CFAP43Q8NDM7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC37.76■■■■□ 3.63
CFAP43Q8NDM7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC37.76■■■■□ 3.63
CFAP43Q8NDM7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC37.76■■■■□ 3.63
CFAP43Q8NDM7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC37.75■■■■□ 3.63
CFAP43Q8NDM7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
CFAP43Q8NDM7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
CFAP43Q8NDM7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC37.74■■■■□ 3.63
CFAP43Q8NDM7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CFAP43Q8NDM7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
CFAP43Q8NDM7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC37.74■■■■□ 3.63
CFAP43Q8NDM7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC37.73■■■■□ 3.63
CFAP43Q8NDM7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC37.73■■■■□ 3.63
CFAP43Q8NDM7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
CFAP43Q8NDM7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC37.73■■■■□ 3.63
CFAP43Q8NDM7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC37.72■■■■□ 3.63
CFAP43Q8NDM7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
CFAP43Q8NDM7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC37.72■■■■□ 3.63
CFAP43Q8NDM7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC37.72■■■■□ 3.63
CFAP43Q8NDM7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
CFAP43Q8NDM7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
CFAP43Q8NDM7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC37.72■■■■□ 3.63
CFAP43Q8NDM7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
CFAP43Q8NDM7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC37.71■■■■□ 3.63
CFAP43Q8NDM7 AC092028.1-203ENST00000608262 953 ntBASIC37.71■■■■□ 3.63
CFAP43Q8NDM7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
CFAP43Q8NDM7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC37.69■■■■□ 3.62
CFAP43Q8NDM7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC37.69■■■■□ 3.62
CFAP43Q8NDM7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
CFAP43Q8NDM7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CFAP43Q8NDM7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC37.68■■■■□ 3.62
CFAP43Q8NDM7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC37.68■■■■□ 3.62
CFAP43Q8NDM7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CFAP43Q8NDM7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC37.68■■■■□ 3.62
CFAP43Q8NDM7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
CFAP43Q8NDM7 AC096631.2-201ENST00000436136 790 ntBASIC37.67■■■■□ 3.62
CFAP43Q8NDM7 MIR4281-201ENST00000580852 62 ntBASIC37.67■■■■□ 3.62
CFAP43Q8NDM7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC37.67■■■■□ 3.62
CFAP43Q8NDM7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC37.67■■■■□ 3.62
CFAP43Q8NDM7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
CFAP43Q8NDM7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 MIR4466-201ENST00000606121 54 ntBASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 MIR3621-201ENST00000580529 85 ntBASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 AL512631.2-201ENST00000604634 923 ntBASIC37.66■■■■□ 3.62
CFAP43Q8NDM7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC37.65■■■■□ 3.62
CFAP43Q8NDM7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC37.65■■■■□ 3.62
CFAP43Q8NDM7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC37.65■■■■□ 3.62
CFAP43Q8NDM7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC37.64■■■■□ 3.62
CFAP43Q8NDM7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC37.63■■■■□ 3.62
CFAP43Q8NDM7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
CFAP43Q8NDM7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC37.63■■■■□ 3.61
CFAP43Q8NDM7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC37.63■■■■□ 3.61
CFAP43Q8NDM7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC37.63■■■■□ 3.61
CFAP43Q8NDM7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC37.62■■■■□ 3.61
CFAP43Q8NDM7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC37.62■■■■□ 3.61
CFAP43Q8NDM7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
CFAP43Q8NDM7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
CFAP43Q8NDM7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 AC120024.1-201ENST00000562672 995 ntBASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 AC133561.4-201ENST00000566112 224 ntBASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 MIR6724-1-201ENST00000616420 92 ntBASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 MIR6724-2-201ENST00000616483 92 ntBASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 MIR6724-4-201ENST00000617390 92 ntBASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 MIR6724-3-201ENST00000622482 92 ntBASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
CFAP43Q8NDM7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC37.6■■■■□ 3.61
CFAP43Q8NDM7 AC005837.3-201ENST00000612163 286 ntBASIC37.6■■■■□ 3.61
CFAP43Q8NDM7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC37.6■■■■□ 3.61
CFAP43Q8NDM7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC37.59■■■■□ 3.61
CFAP43Q8NDM7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
CFAP43Q8NDM7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC37.59■■■■□ 3.61
CFAP43Q8NDM7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC37.58■■■■□ 3.61
CFAP43Q8NDM7 KRT18P10-201ENST00000388836 1287 ntBASIC37.58■■■■□ 3.61
CFAP43Q8NDM7 ZNRF2P3-201ENST00000424200 374 ntBASIC37.58■■■■□ 3.61
CFAP43Q8NDM7 AC026271.2-201ENST00000428091 497 ntBASIC37.58■■■■□ 3.61
CFAP43Q8NDM7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
CFAP43Q8NDM7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.61
CFAP43Q8NDM7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC37.57■■■■□ 3.6
CFAP43Q8NDM7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC37.56■■■■□ 3.6
CFAP43Q8NDM7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC37.56■■■■□ 3.6
CFAP43Q8NDM7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
CFAP43Q8NDM7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC37.56■■■■□ 3.6
CFAP43Q8NDM7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC37.56■■■■□ 3.6
CFAP43Q8NDM7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms