Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LSMEM1Q8N8F7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LSMEM1Q8N8F7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSMEM1Q8N8F7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSMEM1Q8N8F7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSMEM1Q8N8F7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.72■■□□□ 1.07
LSMEM1Q8N8F7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LSMEM1Q8N8F7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LSMEM1Q8N8F7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 RNF126P1-201ENST00000567452 1320 ntBASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LSMEM1Q8N8F7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LSMEM1Q8N8F7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LSMEM1Q8N8F7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LSMEM1Q8N8F7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LSMEM1Q8N8F7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LSMEM1Q8N8F7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LSMEM1Q8N8F7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LSMEM1Q8N8F7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.69■■□□□ 1.06
LSMEM1Q8N8F7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LSMEM1Q8N8F7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.68■■□□□ 1.06
LSMEM1Q8N8F7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LSMEM1Q8N8F7 KRT18P10-201ENST00000388836 1287 ntBASIC21.68■■□□□ 1.06
LSMEM1Q8N8F7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LSMEM1Q8N8F7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.68■■□□□ 1.06
LSMEM1Q8N8F7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LSMEM1Q8N8F7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LSMEM1Q8N8F7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSMEM1Q8N8F7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 AP003733.4-201ENST00000623785 1697 ntBASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.66■■□□□ 1.06
LSMEM1Q8N8F7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
LSMEM1Q8N8F7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSMEM1Q8N8F7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LSMEM1Q8N8F7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
LSMEM1Q8N8F7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LSMEM1Q8N8F7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LSMEM1Q8N8F7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LSMEM1Q8N8F7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
LSMEM1Q8N8F7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LSMEM1Q8N8F7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LSMEM1Q8N8F7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LSMEM1Q8N8F7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LSMEM1Q8N8F7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LSMEM1Q8N8F7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LSMEM1Q8N8F7 AL139125.2-201ENST00000623134 1869 ntBASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 AC009831.1-201ENST00000580420 1582 ntBASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 AC093323.1-202ENST00000635031 2045 ntBASIC21.62■■□□□ 1.05
LSMEM1Q8N8F7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.61■■□□□ 1.05
LSMEM1Q8N8F7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.61■■□□□ 1.05
LSMEM1Q8N8F7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LSMEM1Q8N8F7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LSMEM1Q8N8F7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LSMEM1Q8N8F7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
LSMEM1Q8N8F7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LSMEM1Q8N8F7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms