Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPAS4Q8IUM7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 AC142086.6-201ENST00000621154 1765 ntBASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
NPAS4Q8IUM7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.78■■□□□ 1.72
NPAS4Q8IUM7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 AC010997.5-201ENST00000609182 354 ntBASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPAS4Q8IUM7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.76■■□□□ 1.71
NPAS4Q8IUM7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NPAS4Q8IUM7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
NPAS4Q8IUM7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
NPAS4Q8IUM7 AC131281.2-201ENST00000520478 145 ntBASIC25.76■■□□□ 1.71
NPAS4Q8IUM7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.76■■□□□ 1.71
NPAS4Q8IUM7 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.76■■□□□ 1.71
NPAS4Q8IUM7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.75■■□□□ 1.71
NPAS4Q8IUM7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
NPAS4Q8IUM7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.75■■□□□ 1.71
NPAS4Q8IUM7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
NPAS4Q8IUM7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.75■■□□□ 1.71
NPAS4Q8IUM7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.75■■□□□ 1.71
NPAS4Q8IUM7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NPAS4Q8IUM7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.74■■□□□ 1.71
NPAS4Q8IUM7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.74■■□□□ 1.71
NPAS4Q8IUM7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NPAS4Q8IUM7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.73■■□□□ 1.71
NPAS4Q8IUM7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.73■■□□□ 1.71
NPAS4Q8IUM7 MTDHP2-201ENST00000601468 714 ntBASIC25.73■■□□□ 1.71
NPAS4Q8IUM7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.73■■□□□ 1.71
NPAS4Q8IUM7 AL117332.1-201ENST00000622628 974 ntBASIC25.73■■□□□ 1.71
NPAS4Q8IUM7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 MIR6724-1-201ENST00000616420 92 ntBASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 MIR6724-2-201ENST00000616483 92 ntBASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 MIR6724-4-201ENST00000617390 92 ntBASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 MIR6724-3-201ENST00000622482 92 ntBASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.72■■□□□ 1.71
NPAS4Q8IUM7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.71■■□□□ 1.71
NPAS4Q8IUM7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
NPAS4Q8IUM7 MIR638-201ENST00000385237 100 ntBASIC25.71■■□□□ 1.71
NPAS4Q8IUM7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.71■■□□□ 1.71
NPAS4Q8IUM7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
NPAS4Q8IUM7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NPAS4Q8IUM7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.7■■□□□ 1.7
NPAS4Q8IUM7 MIR935-201ENST00000401179 91 ntBASIC25.7■■□□□ 1.7
NPAS4Q8IUM7 MIR3621-201ENST00000580529 85 ntBASIC25.7■■□□□ 1.7
NPAS4Q8IUM7 AL139246.5-201ENST00000606645 996 ntBASIC25.7■■□□□ 1.7
NPAS4Q8IUM7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.7■■□□□ 1.7
NPAS4Q8IUM7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NPAS4Q8IUM7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NPAS4Q8IUM7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.69■■□□□ 1.7
NPAS4Q8IUM7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.69■■□□□ 1.7
NPAS4Q8IUM7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.69■■□□□ 1.7
NPAS4Q8IUM7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NPAS4Q8IUM7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.69■■□□□ 1.7
NPAS4Q8IUM7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NPAS4Q8IUM7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.68■■□□□ 1.7
NPAS4Q8IUM7 AL136116.3-201ENST00000402907 1138 ntBASIC25.68■■□□□ 1.7
NPAS4Q8IUM7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NPAS4Q8IUM7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.68■■□□□ 1.7
NPAS4Q8IUM7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
NPAS4Q8IUM7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.67■■□□□ 1.7
NPAS4Q8IUM7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NPAS4Q8IUM7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NPAS4Q8IUM7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.66■■□□□ 1.7
NPAS4Q8IUM7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
NPAS4Q8IUM7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.65■■□□□ 1.7
NPAS4Q8IUM7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NPAS4Q8IUM7 AL356740.2-201ENST00000601559 647 ntBASIC25.65■■□□□ 1.7
NPAS4Q8IUM7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.65■■□□□ 1.7
NPAS4Q8IUM7 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms