Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.9■■□□□ 1.42
RAB11FIP1Q6WKZ4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
RAB11FIP1Q6WKZ4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
RAB11FIP1Q6WKZ4 AC120024.1-201ENST00000562672 995 ntBASIC23.89■■□□□ 1.41
RAB11FIP1Q6WKZ4 Z92544.1-202ENST00000571933 1220 ntBASIC23.89■■□□□ 1.41
RAB11FIP1Q6WKZ4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RAB11FIP1Q6WKZ4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.89■■□□□ 1.41
RAB11FIP1Q6WKZ4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 AL592295.1-201ENST00000400984 884 ntBASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.88■■□□□ 1.41
RAB11FIP1Q6WKZ4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RAB11FIP1Q6WKZ4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAB11FIP1Q6WKZ4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAB11FIP1Q6WKZ4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAB11FIP1Q6WKZ4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.87■■□□□ 1.41
RAB11FIP1Q6WKZ4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAB11FIP1Q6WKZ4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.86■■□□□ 1.41
RAB11FIP1Q6WKZ4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAB11FIP1Q6WKZ4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAB11FIP1Q6WKZ4 BX664725.1-201ENST00000438252 379 ntBASIC23.86■■□□□ 1.41
RAB11FIP1Q6WKZ4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.86■■□□□ 1.41
RAB11FIP1Q6WKZ4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAB11FIP1Q6WKZ4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RAB11FIP1Q6WKZ4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RAB11FIP1Q6WKZ4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RAB11FIP1Q6WKZ4 KRT125P-201ENST00000546827 989 ntBASIC23.85■■□□□ 1.41
RAB11FIP1Q6WKZ4 AC131212.1-201ENST00000613771 668 ntBASIC23.85■■□□□ 1.41
RAB11FIP1Q6WKZ4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAB11FIP1Q6WKZ4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB11FIP1Q6WKZ4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB11FIP1Q6WKZ4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.83■■□□□ 1.41
RAB11FIP1Q6WKZ4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.83■■□□□ 1.41
RAB11FIP1Q6WKZ4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RAB11FIP1Q6WKZ4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB11FIP1Q6WKZ4 MIR4787-201ENST00000607364 84 ntBASIC23.82■■□□□ 1.4
RAB11FIP1Q6WKZ4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP1Q6WKZ4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP1Q6WKZ4 ERN1-208ENST00000606895 2068 ntBASIC23.81■■□□□ 1.4
RAB11FIP1Q6WKZ4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP1Q6WKZ4 AL356441.2-201ENST00000443009 864 ntBASIC23.81■■□□□ 1.4
RAB11FIP1Q6WKZ4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB11FIP1Q6WKZ4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.8■■□□□ 1.4
RAB11FIP1Q6WKZ4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP1Q6WKZ4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP1Q6WKZ4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP1Q6WKZ4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP1Q6WKZ4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP1Q6WKZ4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.8■■□□□ 1.4
RAB11FIP1Q6WKZ4 AC135731.1-201ENST00000569415 2548 ntBASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP1Q6WKZ4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 AC137630.3-201ENST00000607245 391 ntBASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 AL121749.1-202ENST00000609313 2153 ntBASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP1Q6WKZ4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP1Q6WKZ4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP1Q6WKZ4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms