Protein–RNA interactions for Protein: Q6UB35

MTHFD1L, Monofunctional C1-tetrahydrofolate synthase, mitochondrial, humanhuman

Predictions only

Length 978 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1LQ6UB35 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
MTHFD1LQ6UB35 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
MTHFD1LQ6UB35 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MTHFD1LQ6UB35 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
MTHFD1LQ6UB35 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
MTHFD1LQ6UB35 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
MTHFD1LQ6UB35 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
MTHFD1LQ6UB35 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MTHFD1LQ6UB35 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MTHFD1LQ6UB35 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MTHFD1LQ6UB35 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
MTHFD1LQ6UB35 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
MTHFD1LQ6UB35 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 BX664725.1-201ENST00000438252 379 ntBASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.34■■□□□ 1.81
MTHFD1LQ6UB35 AL356441.2-201ENST00000443009 864 ntBASIC26.33■■□□□ 1.81
MTHFD1LQ6UB35 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.33■■□□□ 1.81
MTHFD1LQ6UB35 KRT125P-201ENST00000546827 989 ntBASIC26.33■■□□□ 1.81
MTHFD1LQ6UB35 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
MTHFD1LQ6UB35 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MTHFD1LQ6UB35 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 AC137630.3-201ENST00000607245 391 ntBASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 AC131212.1-201ENST00000613771 668 ntBASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MTHFD1LQ6UB35 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 MIR4787-201ENST00000607364 84 ntBASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
MTHFD1LQ6UB35 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
MTHFD1LQ6UB35 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.29■■□□□ 1.8
MTHFD1LQ6UB35 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
MTHFD1LQ6UB35 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MTHFD1LQ6UB35 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.27■■□□□ 1.8
MTHFD1LQ6UB35 MIR4281-201ENST00000580852 62 ntBASIC26.27■■□□□ 1.8
MTHFD1LQ6UB35 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.27■■□□□ 1.8
MTHFD1LQ6UB35 ERN1-208ENST00000606895 2068 ntBASIC26.27■■□□□ 1.8
MTHFD1LQ6UB35 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.26■■□□□ 1.79
MTHFD1LQ6UB35 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.26■■□□□ 1.79
MTHFD1LQ6UB35 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MTHFD1LQ6UB35 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
MTHFD1LQ6UB35 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 AC021242.3-201ENST00000607598 1377 ntBASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MTHFD1LQ6UB35 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 AC096887.2-201ENST00000623443 1957 ntBASIC26.24■■□□□ 1.79
MTHFD1LQ6UB35 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 AL121749.1-202ENST00000609313 2153 ntBASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 AC011551.1-201ENST00000614101 683 ntBASIC26.23■■□□□ 1.79
MTHFD1LQ6UB35 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms