Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.99■■□□□ 1.75
CNKSR3Q6P9H4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.99■■□□□ 1.75
CNKSR3Q6P9H4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.99■■□□□ 1.75
CNKSR3Q6P9H4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.99■■□□□ 1.75
CNKSR3Q6P9H4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CNKSR3Q6P9H4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CNKSR3Q6P9H4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CNKSR3Q6P9H4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CNKSR3Q6P9H4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.98■■□□□ 1.75
CNKSR3Q6P9H4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.98■■□□□ 1.75
CNKSR3Q6P9H4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CNKSR3Q6P9H4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CNKSR3Q6P9H4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CNKSR3Q6P9H4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CNKSR3Q6P9H4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CNKSR3Q6P9H4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
CNKSR3Q6P9H4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.95■■□□□ 1.74
CNKSR3Q6P9H4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 AP004609.3-201ENST00000610705 1884 ntBASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 AC096631.2-201ENST00000436136 790 ntBASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 MIR4466-201ENST00000606121 54 ntBASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
CNKSR3Q6P9H4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
CNKSR3Q6P9H4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.93■■□□□ 1.74
CNKSR3Q6P9H4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.93■■□□□ 1.74
CNKSR3Q6P9H4 AC005837.3-201ENST00000612163 286 ntBASIC25.93■■□□□ 1.74
CNKSR3Q6P9H4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.92■■□□□ 1.74
CNKSR3Q6P9H4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CNKSR3Q6P9H4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CNKSR3Q6P9H4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.92■■□□□ 1.74
CNKSR3Q6P9H4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
CNKSR3Q6P9H4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CNKSR3Q6P9H4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CNKSR3Q6P9H4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CNKSR3Q6P9H4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CNKSR3Q6P9H4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CNKSR3Q6P9H4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.9■■□□□ 1.74
CNKSR3Q6P9H4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CNKSR3Q6P9H4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
CNKSR3Q6P9H4 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.9■■□□□ 1.74
CNKSR3Q6P9H4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.9■■□□□ 1.74
CNKSR3Q6P9H4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CNKSR3Q6P9H4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CNKSR3Q6P9H4 AL512631.2-201ENST00000604634 923 ntBASIC25.89■■□□□ 1.74
CNKSR3Q6P9H4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
CNKSR3Q6P9H4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 AC133561.4-201ENST00000566112 224 ntBASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CNKSR3Q6P9H4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CNKSR3Q6P9H4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.87■■□□□ 1.73
CNKSR3Q6P9H4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.87■■□□□ 1.73
CNKSR3Q6P9H4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.87■■□□□ 1.73
CNKSR3Q6P9H4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.86■■□□□ 1.73
CNKSR3Q6P9H4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.86■■□□□ 1.73
CNKSR3Q6P9H4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CNKSR3Q6P9H4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CNKSR3Q6P9H4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.85■■□□□ 1.73
CNKSR3Q6P9H4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CNKSR3Q6P9H4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CNKSR3Q6P9H4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.85■■□□□ 1.73
CNKSR3Q6P9H4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CNKSR3Q6P9H4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
CNKSR3Q6P9H4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.84■■□□□ 1.73
CNKSR3Q6P9H4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CNKSR3Q6P9H4 AC139426.1-201ENST00000568218 2529 ntBASIC25.84■■□□□ 1.73
CNKSR3Q6P9H4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CNKSR3Q6P9H4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CNKSR3Q6P9H4 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.83■■□□□ 1.73
CNKSR3Q6P9H4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.83■■□□□ 1.73
CNKSR3Q6P9H4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.83■■□□□ 1.73
CNKSR3Q6P9H4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
CNKSR3Q6P9H4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CNKSR3Q6P9H4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.82■■□□□ 1.72
CNKSR3Q6P9H4 AF131216.4-201ENST00000638924 1588 ntBASIC25.82■■□□□ 1.72
CNKSR3Q6P9H4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms