Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC58Q4VC31 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC58Q4VC31 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC58Q4VC31 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC58Q4VC31 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC58Q4VC31 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC58Q4VC31 LINC01124-201ENST00000409786 2117 ntBASIC21.05■□□□□ 0.96
CCDC58Q4VC31 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC58Q4VC31 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC58Q4VC31 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC58Q4VC31 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC58Q4VC31 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC58Q4VC31 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC58Q4VC31 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC58Q4VC31 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC58Q4VC31 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC58Q4VC31 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC58Q4VC31 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC58Q4VC31 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC58Q4VC31 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC58Q4VC31 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC58Q4VC31 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC58Q4VC31 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.02■□□□□ 0.95
CCDC58Q4VC31 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC58Q4VC31 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC58Q4VC31 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC58Q4VC31 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC58Q4VC31 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC58Q4VC31 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21■□□□□ 0.95
CCDC58Q4VC31 SLC6A10P-202ENST00000431994 2058 ntBASIC21■□□□□ 0.95
CCDC58Q4VC31 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC58Q4VC31 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC58Q4VC31 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21■□□□□ 0.95
CCDC58Q4VC31 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC58Q4VC31 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC58Q4VC31 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC58Q4VC31 AL024507.2-201ENST00000606070 2574 ntBASIC20.99■□□□□ 0.95
CCDC58Q4VC31 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC58Q4VC31 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC58Q4VC31 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC58Q4VC31 AC141586.4-201ENST00000624558 1573 ntBASIC20.97■□□□□ 0.95
CCDC58Q4VC31 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC58Q4VC31 AC068473.5-201ENST00000616428 2072 ntBASIC20.97■□□□□ 0.95
CCDC58Q4VC31 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC58Q4VC31 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC58Q4VC31 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC58Q4VC31 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC58Q4VC31 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC58Q4VC31 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC58Q4VC31 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC58Q4VC31 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC58Q4VC31 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC58Q4VC31 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC58Q4VC31 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC58Q4VC31 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
CCDC58Q4VC31 DUX4L11-201ENST00000611504 1267 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms