Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCGF3Q3KNV8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCGF3Q3KNV8 AC093536.1-201ENST00000569153 554 ntBASIC20.82■□□□□ 0.92
PCGF3Q3KNV8 AC133552.2-201ENST00000619106 1032 ntBASIC20.82■□□□□ 0.92
PCGF3Q3KNV8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCGF3Q3KNV8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 AC010501.1-201ENST00000606270 1962 ntBASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 AC026202.3-201ENST00000600805 1127 ntBASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 AC012354.3-201ENST00000623734 483 ntBASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCGF3Q3KNV8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 AC009831.1-201ENST00000580420 1582 ntBASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PCGF3Q3KNV8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF3Q3KNV8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF3Q3KNV8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF3Q3KNV8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCGF3Q3KNV8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCGF3Q3KNV8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.79■□□□□ 0.92
PCGF3Q3KNV8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 AL139125.2-201ENST00000623134 1869 ntBASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.78■□□□□ 0.92
PCGF3Q3KNV8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCGF3Q3KNV8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.77■□□□□ 0.92
PCGF3Q3KNV8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.77■□□□□ 0.92
PCGF3Q3KNV8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCGF3Q3KNV8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.77■□□□□ 0.92
PCGF3Q3KNV8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.77■□□□□ 0.92
PCGF3Q3KNV8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCGF3Q3KNV8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 KRT18P60-201ENST00000312876 1297 ntBASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 RAP2CP1-202ENST00000605179 643 ntBASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 AC138932.3-201ENST00000567634 1902 ntBASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 AC022211.4-201ENST00000625094 2161 ntBASIC20.76■□□□□ 0.91
PCGF3Q3KNV8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCGF3Q3KNV8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCGF3Q3KNV8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 AL592293.1-201ENST00000502889 1188 ntBASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCGF3Q3KNV8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms