Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HIST1H3AP68431 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H3AP68431 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
HIST1H3AP68431 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HIST1H3AP68431 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HIST1H3AP68431 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H3AP68431 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H3AP68431 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H3AP68431 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H3AP68431 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.76■□□□□ 0.91
HIST1H3AP68431 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.76■□□□□ 0.91
HIST1H3AP68431 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H3AP68431 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HIST1H3AP68431 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HIST1H3AP68431 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.76■□□□□ 0.91
HIST1H3AP68431 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H3AP68431 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H3AP68431 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.75■□□□□ 0.91
HIST1H3AP68431 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H3AP68431 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HIST1H3AP68431 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HIST1H3AP68431 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H3AP68431 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H3AP68431 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HIST1H3AP68431 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HIST1H3AP68431 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIST1H3AP68431 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HIST1H3AP68431 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIST1H3AP68431 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HIST1H3AP68431 AL592293.1-201ENST00000502889 1188 ntBASIC20.74■□□□□ 0.91
HIST1H3AP68431 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HIST1H3AP68431 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HIST1H3AP68431 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.73■□□□□ 0.91
HIST1H3AP68431 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HIST1H3AP68431 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HIST1H3AP68431 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HIST1H3AP68431 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H3AP68431 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H3AP68431 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HIST1H3AP68431 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H3AP68431 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.72■□□□□ 0.91
HIST1H3AP68431 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.72■□□□□ 0.91
HIST1H3AP68431 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HIST1H3AP68431 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HIST1H3AP68431 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H3AP68431 AP003733.4-201ENST00000623785 1697 ntBASIC20.71■□□□□ 0.91
HIST1H3AP68431 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.71■□□□□ 0.91
HIST1H3AP68431 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H3AP68431 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H3AP68431 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HIST1H3AP68431 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HIST1H3AP68431 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H3AP68431 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
HIST1H3AP68431 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H3AP68431 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HIST1H3AP68431 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H3AP68431 SPCS2P3-201ENST00000500401 656 ntBASIC20.7■□□□□ 0.9
HIST1H3AP68431 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H3AP68431 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HIST1H3AP68431 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HIST1H3AP68431 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H3AP68431 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H3AP68431 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H3AP68431 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.69■□□□□ 0.9
HIST1H3AP68431 U85056.1-201ENST00000616429 682 ntBASIC20.69■□□□□ 0.9
HIST1H3AP68431 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H3AP68431 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.69■□□□□ 0.9
HIST1H3AP68431 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H3AP68431 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H3AP68431 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.68■□□□□ 0.9
HIST1H3AP68431 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H3AP68431 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H3AP68431 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H3AP68431 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST1H3AP68431 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H3AP68431 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST1H3AP68431 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H3AP68431 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HIST1H3AP68431 MIR6089-201ENST00000616698 64 ntBASIC20.67■□□□□ 0.9
HIST1H3AP68431 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
HIST1H3AP68431 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST1H3AP68431 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H3AP68431 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H3AP68431 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST1H3AP68431 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H3AP68431 AL139125.2-201ENST00000623134 1869 ntBASIC20.66■□□□□ 0.9
HIST1H3AP68431 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H3AP68431 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H3AP68431 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HIST1H3AP68431 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H3AP68431 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST1H3AP68431 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H3AP68431 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H3AP68431 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST1H3AP68431 RPS2P7-201ENST00000447334 885 ntBASIC20.65■□□□□ 0.9
HIST1H3AP68431 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HIST1H3AP68431 AC018755.3-202ENST00000596210 929 ntBASIC20.65■□□□□ 0.9
HIST1H3AP68431 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HIST1H3AP68431 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
HIST1H3AP68431 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms