Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXG1P55316 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXG1P55316 AC097639.1-201ENST00000565519 1891 ntBASIC20.92■□□□□ 0.94
FOXG1P55316 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXG1P55316 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
FOXG1P55316 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXG1P55316 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXG1P55316 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXG1P55316 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXG1P55316 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXG1P55316 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXG1P55316 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXG1P55316 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXG1P55316 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.91■□□□□ 0.94
FOXG1P55316 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXG1P55316 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXG1P55316 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
FOXG1P55316 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXG1P55316 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXG1P55316 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXG1P55316 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.89■□□□□ 0.94
FOXG1P55316 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXG1P55316 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXG1P55316 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXG1P55316 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXG1P55316 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXG1P55316 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXG1P55316 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXG1P55316 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
FOXG1P55316 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXG1P55316 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
FOXG1P55316 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXG1P55316 AC019171.1-201ENST00000601251 1056 ntBASIC20.88■□□□□ 0.93
FOXG1P55316 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXG1P55316 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXG1P55316 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FOXG1P55316 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXG1P55316 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXG1P55316 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXG1P55316 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXG1P55316 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXG1P55316 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXG1P55316 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
FOXG1P55316 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.86■□□□□ 0.93
FOXG1P55316 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.86■□□□□ 0.93
FOXG1P55316 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXG1P55316 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXG1P55316 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
FOXG1P55316 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXG1P55316 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXG1P55316 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXG1P55316 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXG1P55316 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXG1P55316 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXG1P55316 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXG1P55316 MIR4508-201ENST00000584178 70 ntBASIC20.85■□□□□ 0.93
FOXG1P55316 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXG1P55316 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXG1P55316 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXG1P55316 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXG1P55316 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXG1P55316 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXG1P55316 YBX1P4-201ENST00000392794 808 ntBASIC20.83■□□□□ 0.93
FOXG1P55316 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXG1P55316 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXG1P55316 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXG1P55316 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXG1P55316 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXG1P55316 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
FOXG1P55316 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
FOXG1P55316 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXG1P55316 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.82■□□□□ 0.92
FOXG1P55316 AC103724.3-201ENST00000564481 992 ntBASIC20.82■□□□□ 0.92
FOXG1P55316 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXG1P55316 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXG1P55316 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXG1P55316 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXG1P55316 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
FOXG1P55316 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
FOXG1P55316 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.81■□□□□ 0.92
FOXG1P55316 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.81■□□□□ 0.92
FOXG1P55316 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FOXG1P55316 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.81■□□□□ 0.92
FOXG1P55316 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
FOXG1P55316 FOXO3B-201ENST00000395675 1928 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms