Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
CLTCL1P53675 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CLTCL1P53675 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CLTCL1P53675 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC34.62■■■■□ 3.13
CLTCL1P53675 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
CLTCL1P53675 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.61■■■■□ 3.13
CLTCL1P53675 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CLTCL1P53675 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC34.6■■■■□ 3.13
CLTCL1P53675 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC34.6■■■■□ 3.13
CLTCL1P53675 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CLTCL1P53675 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC34.59■■■■□ 3.13
CLTCL1P53675 SNAI3-AS1-204ENST00000567997 2048 ntBASIC34.59■■■■□ 3.13
CLTCL1P53675 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
CLTCL1P53675 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CLTCL1P53675 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC34.59■■■■□ 3.13
CLTCL1P53675 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CLTCL1P53675 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC34.58■■■■□ 3.13
CLTCL1P53675 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC34.58■■■■□ 3.13
CLTCL1P53675 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
CLTCL1P53675 AC131281.2-201ENST00000520478 145 ntBASIC34.58■■■■□ 3.13
CLTCL1P53675 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.57■■■■□ 3.12
CLTCL1P53675 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC34.57■■■■□ 3.12
CLTCL1P53675 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CLTCL1P53675 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CLTCL1P53675 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC34.56■■■■□ 3.12
CLTCL1P53675 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.56■■■■□ 3.12
CLTCL1P53675 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC34.56■■■■□ 3.12
CLTCL1P53675 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.55■■■■□ 3.12
CLTCL1P53675 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC34.55■■■■□ 3.12
CLTCL1P53675 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC34.55■■■■□ 3.12
CLTCL1P53675 TSPY9P-201ENST00000440215 945 ntBASIC34.55■■■■□ 3.12
CLTCL1P53675 TSPY11P-201ENST00000442607 1045 ntBASIC34.55■■■■□ 3.12
CLTCL1P53675 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
CLTCL1P53675 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CLTCL1P53675 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CLTCL1P53675 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CLTCL1P53675 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC34.54■■■■□ 3.12
CLTCL1P53675 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC34.53■■■■□ 3.12
CLTCL1P53675 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
CLTCL1P53675 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
CLTCL1P53675 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.53■■■■□ 3.12
CLTCL1P53675 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CLTCL1P53675 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CLTCL1P53675 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CLTCL1P53675 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
CLTCL1P53675 AC092028.1-203ENST00000608262 953 ntBASIC34.52■■■■□ 3.12
CLTCL1P53675 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC34.51■■■■□ 3.12
CLTCL1P53675 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
CLTCL1P53675 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.5■■■■□ 3.11
CLTCL1P53675 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CLTCL1P53675 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
CLTCL1P53675 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.5■■■■□ 3.11
CLTCL1P53675 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
CLTCL1P53675 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.49■■■■□ 3.11
CLTCL1P53675 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC34.48■■■■□ 3.11
CLTCL1P53675 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CLTCL1P53675 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.48■■■■□ 3.11
CLTCL1P53675 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.48■■■■□ 3.11
CLTCL1P53675 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC34.46■■■■□ 3.11
CLTCL1P53675 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
CLTCL1P53675 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CLTCL1P53675 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
CLTCL1P53675 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.46■■■■□ 3.11
CLTCL1P53675 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.46■■■■□ 3.11
CLTCL1P53675 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CLTCL1P53675 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
CLTCL1P53675 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC34.45■■■■□ 3.1
CLTCL1P53675 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.44■■■■□ 3.1
CLTCL1P53675 GAK-223ENST00000628912 497 ntTSL 5 BASIC34.44■■■■□ 3.1
CLTCL1P53675 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.44■■■■□ 3.1
CLTCL1P53675 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC34.44■■■■□ 3.1
CLTCL1P53675 TRIR-202ENST00000588213 841 ntTSL 3 BASIC34.44■■■■□ 3.1
CLTCL1P53675 AL117332.1-201ENST00000622628 974 ntBASIC34.44■■■■□ 3.1
CLTCL1P53675 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC34.44■■■■□ 3.1
CLTCL1P53675 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC34.44■■■■□ 3.1
CLTCL1P53675 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CLTCL1P53675 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CLTCL1P53675 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CLTCL1P53675 AC008406.3-201ENST00000620001 1374 ntBASIC34.43■■■■□ 3.1
CLTCL1P53675 AF131216.4-201ENST00000638924 1588 ntBASIC34.43■■■■□ 3.1
CLTCL1P53675 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CLTCL1P53675 AC096887.2-201ENST00000623443 1957 ntBASIC34.42■■■■□ 3.1
CLTCL1P53675 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC34.42■■■■□ 3.1
CLTCL1P53675 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC34.41■■■■□ 3.1
CLTCL1P53675 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
CLTCL1P53675 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC34.41■■■■□ 3.1
CLTCL1P53675 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC34.41■■■■□ 3.1
CLTCL1P53675 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CLTCL1P53675 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
CLTCL1P53675 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms