Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.37■■□□□ 1.81
RFC5P40937 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.37■■□□□ 1.81
RFC5P40937 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RFC5P40937 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.37■■□□□ 1.81
RFC5P40937 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.37■■□□□ 1.81
RFC5P40937 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFC5P40937 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RFC5P40937 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RFC5P40937 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.36■■□□□ 1.81
RFC5P40937 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC5P40937 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC5P40937 AL592295.1-201ENST00000400984 884 ntBASIC26.35■■□□□ 1.81
RFC5P40937 AL031848.2-201ENST00000607670 837 ntBASIC26.35■■□□□ 1.81
RFC5P40937 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFC5P40937 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.34■■□□□ 1.81
RFC5P40937 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
RFC5P40937 AC097639.1-201ENST00000565519 1891 ntBASIC26.34■■□□□ 1.81
RFC5P40937 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.34■■□□□ 1.81
RFC5P40937 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
RFC5P40937 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFC5P40937 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFC5P40937 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFC5P40937 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
RFC5P40937 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFC5P40937 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.33■■□□□ 1.81
RFC5P40937 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFC5P40937 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC5P40937 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC5P40937 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
RFC5P40937 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC5P40937 AL035685.1-201ENST00000636663 812 ntBASIC26.31■■□□□ 1.8
RFC5P40937 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC5P40937 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC5P40937 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RFC5P40937 DUSP8P4-201ENST00000399538 1761 ntBASIC26.3■■□□□ 1.8
RFC5P40937 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC5P40937 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RFC5P40937 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RFC5P40937 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC5P40937 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RFC5P40937 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RFC5P40937 KRT18P24-201ENST00000344739 1156 ntBASIC26.29■■□□□ 1.8
RFC5P40937 AC009299.2-201ENST00000482477 511 ntBASIC26.29■■□□□ 1.8
RFC5P40937 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RFC5P40937 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
RFC5P40937 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.29■■□□□ 1.8
RFC5P40937 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFC5P40937 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RFC5P40937 AC091060.1-201ENST00000623524 1766 ntBASIC26.28■■□□□ 1.8
RFC5P40937 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.28■■□□□ 1.8
RFC5P40937 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RFC5P40937 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFC5P40937 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFC5P40937 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RFC5P40937 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.27■■□□□ 1.8
RFC5P40937 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RFC5P40937 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.27■■□□□ 1.8
RFC5P40937 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.27■■□□□ 1.8
RFC5P40937 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.27■■□□□ 1.8
RFC5P40937 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.27■■□□□ 1.8
RFC5P40937 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
RFC5P40937 AC145676.1-201ENST00000514988 2004 ntBASIC26.26■■□□□ 1.79
RFC5P40937 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RFC5P40937 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFC5P40937 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RFC5P40937 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RFC5P40937 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.25■■□□□ 1.79
RFC5P40937 THA1P-201ENST00000590384 1145 ntBASIC26.25■■□□□ 1.79
RFC5P40937 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RFC5P40937 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.24■■□□□ 1.79
RFC5P40937 FOXO3B-201ENST00000395675 1928 ntBASIC26.24■■□□□ 1.79
RFC5P40937 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.24■■□□□ 1.79
RFC5P40937 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFC5P40937 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RFC5P40937 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
RFC5P40937 AC120024.1-201ENST00000562672 995 ntBASIC26.23■■□□□ 1.79
RFC5P40937 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.23■■□□□ 1.79
RFC5P40937 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC5P40937 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.23■■□□□ 1.79
RFC5P40937 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.23■■□□□ 1.79
RFC5P40937 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RFC5P40937 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.23■■□□□ 1.79
RFC5P40937 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RFC5P40937 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
RFC5P40937 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.22■■□□□ 1.79
RFC5P40937 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC5P40937 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC5P40937 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.22■■□□□ 1.79
RFC5P40937 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RFC5P40937 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFC5P40937 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RFC5P40937 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RFC5P40937 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.21■■□□□ 1.79
RFC5P40937 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.21■■□□□ 1.79
RFC5P40937 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.21■■□□□ 1.79
RFC5P40937 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RFC5P40937 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.2■■□□□ 1.79
RFC5P40937 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFC5P40937 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFC5P40937 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms