Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.54■□□□□ 0.88
GDNFP39905 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDNFP39905 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDNFP39905 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDNFP39905 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDNFP39905 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GDNFP39905 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDNFP39905 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDNFP39905 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
GDNFP39905 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDNFP39905 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.53■□□□□ 0.88
GDNFP39905 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDNFP39905 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GDNFP39905 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
GDNFP39905 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.52■□□□□ 0.88
GDNFP39905 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDNFP39905 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDNFP39905 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GDNFP39905 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDNFP39905 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.51■□□□□ 0.87
GDNFP39905 AC008813.1-201ENST00000536597 885 ntBASIC20.51■□□□□ 0.87
GDNFP39905 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.51■□□□□ 0.87
GDNFP39905 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
GDNFP39905 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.51■□□□□ 0.87
GDNFP39905 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.51■□□□□ 0.87
GDNFP39905 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GDNFP39905 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.51■□□□□ 0.87
GDNFP39905 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GDNFP39905 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDNFP39905 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDNFP39905 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GDNFP39905 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDNFP39905 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.5■□□□□ 0.87
GDNFP39905 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDNFP39905 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.5■□□□□ 0.87
GDNFP39905 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GDNFP39905 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
GDNFP39905 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.49■□□□□ 0.87
GDNFP39905 MIR219A2-201ENST00000608502 1504 ntBASIC20.49■□□□□ 0.87
GDNFP39905 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.49■□□□□ 0.87
GDNFP39905 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GDNFP39905 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.48■□□□□ 0.87
GDNFP39905 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDNFP39905 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDNFP39905 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.48■□□□□ 0.87
GDNFP39905 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.48■□□□□ 0.87
GDNFP39905 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.48■□□□□ 0.87
GDNFP39905 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDNFP39905 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GDNFP39905 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GDNFP39905 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.48■□□□□ 0.87
GDNFP39905 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
GDNFP39905 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GDNFP39905 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDNFP39905 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.47■□□□□ 0.87
GDNFP39905 AC148477.6-201ENST00000623746 465 ntBASIC20.47■□□□□ 0.87
GDNFP39905 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.47■□□□□ 0.87
GDNFP39905 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDNFP39905 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GDNFP39905 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GDNFP39905 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
GDNFP39905 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 DUSP8P5-201ENST00000422884 1815 ntBASIC20.46■□□□□ 0.87
GDNFP39905 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.46■□□□□ 0.87
GDNFP39905 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.46■□□□□ 0.87
GDNFP39905 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GDNFP39905 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GDNFP39905 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDNFP39905 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDNFP39905 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.45■□□□□ 0.86
GDNFP39905 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
GDNFP39905 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.45■□□□□ 0.86
GDNFP39905 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDNFP39905 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GDNFP39905 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
GDNFP39905 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GDNFP39905 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDNFP39905 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
GDNFP39905 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
GDNFP39905 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GDNFP39905 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GDNFP39905 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GDNFP39905 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms