Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SDHBP21912 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SDHBP21912 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SDHBP21912 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.42■■□□□ 1.34
SDHBP21912 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.42■■□□□ 1.34
SDHBP21912 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.42■■□□□ 1.34
SDHBP21912 AC090192.1-201ENST00000517740 490 ntBASIC23.42■■□□□ 1.34
SDHBP21912 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.42■■□□□ 1.34
SDHBP21912 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.42■■□□□ 1.34
SDHBP21912 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SDHBP21912 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
SDHBP21912 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.41■■□□□ 1.34
SDHBP21912 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SDHBP21912 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SDHBP21912 RARRES2P11-201ENST00000635158 484 ntBASIC23.41■■□□□ 1.34
SDHBP21912 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.41■■□□□ 1.34
SDHBP21912 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SDHBP21912 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.4■■□□□ 1.34
SDHBP21912 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SDHBP21912 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.4■■□□□ 1.34
SDHBP21912 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SDHBP21912 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.4■■□□□ 1.34
SDHBP21912 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.39■■□□□ 1.34
SDHBP21912 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
SDHBP21912 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SDHBP21912 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SDHBP21912 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SDHBP21912 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
SDHBP21912 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SDHBP21912 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SDHBP21912 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.38■■□□□ 1.33
SDHBP21912 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SDHBP21912 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SDHBP21912 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SDHBP21912 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SDHBP21912 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.37■■□□□ 1.33
SDHBP21912 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.37■■□□□ 1.33
SDHBP21912 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
SDHBP21912 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SDHBP21912 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.37■■□□□ 1.33
SDHBP21912 AL136967.2-201ENST00000623968 743 ntBASIC23.37■■□□□ 1.33
SDHBP21912 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SDHBP21912 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SDHBP21912 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.36■■□□□ 1.33
SDHBP21912 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SDHBP21912 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SDHBP21912 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.36■■□□□ 1.33
SDHBP21912 AC087623.3-201ENST00000607047 1098 ntBASIC23.36■■□□□ 1.33
SDHBP21912 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SDHBP21912 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SDHBP21912 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.36■■□□□ 1.33
SDHBP21912 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SDHBP21912 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.36■■□□□ 1.33
SDHBP21912 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SDHBP21912 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SDHBP21912 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.35■■□□□ 1.33
SDHBP21912 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SDHBP21912 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.35■■□□□ 1.33
SDHBP21912 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SDHBP21912 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SDHBP21912 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.34■■□□□ 1.33
SDHBP21912 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SDHBP21912 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SDHBP21912 AC024257.2-201ENST00000549699 147 ntBASIC23.34■■□□□ 1.33
SDHBP21912 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
SDHBP21912 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SDHBP21912 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SDHBP21912 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.33■■□□□ 1.33
SDHBP21912 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SDHBP21912 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.33■■□□□ 1.33
SDHBP21912 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SDHBP21912 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.33■■□□□ 1.32
SDHBP21912 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.33■■□□□ 1.32
SDHBP21912 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
SDHBP21912 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
SDHBP21912 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SDHBP21912 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SDHBP21912 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.32■■□□□ 1.32
SDHBP21912 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.32■■□□□ 1.32
SDHBP21912 AC011551.1-201ENST00000614101 683 ntBASIC23.32■■□□□ 1.32
SDHBP21912 AP002414.2-202ENST00000590929 1450 ntBASIC23.31■■□□□ 1.32
SDHBP21912 SRD5A1P1-201ENST00000442297 786 ntBASIC23.31■■□□□ 1.32
SDHBP21912 AC004448.1-201ENST00000458332 883 ntBASIC23.31■■□□□ 1.32
SDHBP21912 AC091305.1-201ENST00000479476 895 ntBASIC23.31■■□□□ 1.32
SDHBP21912 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.31■■□□□ 1.32
SDHBP21912 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.31■■□□□ 1.32
SDHBP21912 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
SDHBP21912 AF213884.3-201ENST00000563833 479 ntBASIC23.3■■□□□ 1.32
SDHBP21912 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.3■■□□□ 1.32
SDHBP21912 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SDHBP21912 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.3■■□□□ 1.32
SDHBP21912 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.3■■□□□ 1.32
SDHBP21912 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SDHBP21912 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SDHBP21912 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SDHBP21912 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SDHBP21912 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SDHBP21912 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SDHBP21912 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.29■■□□□ 1.32
SDHBP21912 MIR939-201ENST00000401314 82 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms