Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.95■■■□□ 2.7
COL5A2P05997 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC31.95■■■□□ 2.7
COL5A2P05997 AL356740.2-201ENST00000601559 647 ntBASIC31.95■■■□□ 2.7
COL5A2P05997 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
COL5A2P05997 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC31.94■■■□□ 2.7
COL5A2P05997 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.94■■■□□ 2.7
COL5A2P05997 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
COL5A2P05997 GAK-223ENST00000628912 497 ntTSL 5 BASIC31.94■■■□□ 2.7
COL5A2P05997 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
COL5A2P05997 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
COL5A2P05997 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.93■■■□□ 2.7
COL5A2P05997 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC31.93■■■□□ 2.7
COL5A2P05997 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL5A2P05997 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL5A2P05997 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL5A2P05997 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL5A2P05997 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.92■■■□□ 2.7
COL5A2P05997 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.92■■■□□ 2.7
COL5A2P05997 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL5A2P05997 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL5A2P05997 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.91■■■□□ 2.7
COL5A2P05997 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.91■■■□□ 2.7
COL5A2P05997 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COL5A2P05997 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COL5A2P05997 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
COL5A2P05997 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
COL5A2P05997 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
COL5A2P05997 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
COL5A2P05997 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
COL5A2P05997 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC31.88■■■□□ 2.69
COL5A2P05997 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
COL5A2P05997 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
COL5A2P05997 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
COL5A2P05997 CD72-202ENST00000378430 585 ntTSL 3 BASIC31.87■■■□□ 2.69
COL5A2P05997 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC31.87■■■□□ 2.69
COL5A2P05997 RARRES2P6-201ENST00000567333 442 ntBASIC31.87■■■□□ 2.69
COL5A2P05997 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC31.87■■■□□ 2.69
COL5A2P05997 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
COL5A2P05997 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.86■■■□□ 2.69
COL5A2P05997 ZNRF2P3-201ENST00000424200 374 ntBASIC31.86■■■□□ 2.69
COL5A2P05997 AK3-203ENST00000447596 705 ntTSL 2 BASIC31.86■■■□□ 2.69
COL5A2P05997 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
COL5A2P05997 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL5A2P05997 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL5A2P05997 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
COL5A2P05997 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
COL5A2P05997 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC31.85■■■□□ 2.69
COL5A2P05997 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL5A2P05997 AF131216.4-201ENST00000638924 1588 ntBASIC31.85■■■□□ 2.69
COL5A2P05997 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
COL5A2P05997 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
COL5A2P05997 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
COL5A2P05997 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.84■■■□□ 2.69
COL5A2P05997 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL5A2P05997 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
COL5A2P05997 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
COL5A2P05997 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.83■■■□□ 2.69
COL5A2P05997 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC31.83■■■□□ 2.69
COL5A2P05997 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC31.83■■■□□ 2.69
COL5A2P05997 CLTA-210ENST00000540080 989 ntTSL 2 BASIC31.83■■■□□ 2.69
COL5A2P05997 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
COL5A2P05997 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
COL5A2P05997 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.82■■■□□ 2.68
COL5A2P05997 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
COL5A2P05997 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.82■■■□□ 2.68
COL5A2P05997 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
COL5A2P05997 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
COL5A2P05997 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.81■■■□□ 2.68
COL5A2P05997 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
COL5A2P05997 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL5A2P05997 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
COL5A2P05997 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
COL5A2P05997 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
COL5A2P05997 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL5A2P05997 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
COL5A2P05997 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
COL5A2P05997 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
COL5A2P05997 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
COL5A2P05997 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
COL5A2P05997 AC106739.1-201ENST00000617035 715 ntBASIC31.78■■■□□ 2.68
COL5A2P05997 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
COL5A2P05997 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC31.78■■■□□ 2.68
COL5A2P05997 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
COL5A2P05997 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL5A2P05997 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.77■■■□□ 2.68
COL5A2P05997 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
COL5A2P05997 TFPT-201ENST00000391757 774 ntTSL 5 BASIC31.77■■■□□ 2.68
COL5A2P05997 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL5A2P05997 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.77■■■□□ 2.68
COL5A2P05997 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
COL5A2P05997 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.76■■■□□ 2.67
COL5A2P05997 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.76■■■□□ 2.67
COL5A2P05997 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
COL5A2P05997 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.76■■■□□ 2.67
COL5A2P05997 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL5A2P05997 AL031432.3-201ENST00000607698 485 ntBASIC31.75■■■□□ 2.67
COL5A2P05997 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.75■■■□□ 2.67
COL5A2P05997 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
COL5A2P05997 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
COL5A2P05997 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 310.5 ms