Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD74P04233 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CD74P04233 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD74P04233 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.95■□□□□ 0.78
CD74P04233 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD74P04233 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
CD74P04233 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.94■□□□□ 0.78
CD74P04233 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CD74P04233 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.94■□□□□ 0.78
CD74P04233 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 AC087741.3-201ENST00000624270 1347 ntBASIC19.94■□□□□ 0.78
CD74P04233 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD74P04233 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CD74P04233 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CD74P04233 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.93■□□□□ 0.78
CD74P04233 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD74P04233 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
CD74P04233 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD74P04233 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CD74P04233 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD74P04233 AP006261.1-201ENST00000584783 668 ntBASIC19.93■□□□□ 0.78
CD74P04233 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD74P04233 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD74P04233 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.93■□□□□ 0.78
CD74P04233 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD74P04233 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CD74P04233 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.92■□□□□ 0.78
CD74P04233 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.92■□□□□ 0.78
CD74P04233 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD74P04233 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CD74P04233 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.91■□□□□ 0.78
CD74P04233 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CD74P04233 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.91■□□□□ 0.78
CD74P04233 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD74P04233 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD74P04233 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD74P04233 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CD74P04233 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD74P04233 MIR219A2-201ENST00000608502 1504 ntBASIC19.9■□□□□ 0.78
CD74P04233 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD74P04233 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.9■□□□□ 0.78
CD74P04233 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD74P04233 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD74P04233 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD74P04233 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD74P04233 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.89■□□□□ 0.77
CD74P04233 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.89■□□□□ 0.77
CD74P04233 AL359258.2-201ENST00000564063 1566 ntBASIC19.89■□□□□ 0.77
CD74P04233 AC021231.2-201ENST00000594613 730 ntBASIC19.89■□□□□ 0.77
CD74P04233 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CD74P04233 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD74P04233 CLDN5-201ENST00000403084 2357 ntBASIC19.88■□□□□ 0.77
CD74P04233 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD74P04233 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD74P04233 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.88■□□□□ 0.77
CD74P04233 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD74P04233 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD74P04233 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD74P04233 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD74P04233 AC148477.6-201ENST00000623746 465 ntBASIC19.88■□□□□ 0.77
CD74P04233 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.88■□□□□ 0.77
CD74P04233 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.88■□□□□ 0.77
CD74P04233 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
CD74P04233 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
CD74P04233 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD74P04233 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD74P04233 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CD74P04233 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CD74P04233 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.87■□□□□ 0.77
CD74P04233 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD74P04233 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CD74P04233 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.87■□□□□ 0.77
CD74P04233 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD74P04233 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD74P04233 AC008813.1-201ENST00000536597 885 ntBASIC19.86■□□□□ 0.77
CD74P04233 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD74P04233 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD74P04233 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD74P04233 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD74P04233 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD74P04233 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD74P04233 AC044849.2-201ENST00000606596 710 ntBASIC19.85■□□□□ 0.77
CD74P04233 MIR6089-201ENST00000616698 64 ntBASIC19.85■□□□□ 0.77
CD74P04233 ABCB10P4-201ENST00000566803 2184 ntBASIC19.85■□□□□ 0.77
CD74P04233 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD74P04233 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CD74P04233 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms