Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APOC3P02656 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APOC3P02656 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.18■□□□□ 0.66
APOC3P02656 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APOC3P02656 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
APOC3P02656 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.18■□□□□ 0.66
APOC3P02656 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.17■□□□□ 0.66
APOC3P02656 RNF165-205ENST00000588679 2904 ntBASIC19.17■□□□□ 0.66
APOC3P02656 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
APOC3P02656 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.17■□□□□ 0.66
APOC3P02656 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
APOC3P02656 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.17■□□□□ 0.66
APOC3P02656 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.17■□□□□ 0.66
APOC3P02656 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APOC3P02656 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
APOC3P02656 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOC3P02656 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.16■□□□□ 0.66
APOC3P02656 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.16■□□□□ 0.66
APOC3P02656 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOC3P02656 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOC3P02656 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOC3P02656 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.16■□□□□ 0.66
APOC3P02656 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOC3P02656 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.15■□□□□ 0.66
APOC3P02656 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.15■□□□□ 0.66
APOC3P02656 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
APOC3P02656 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOC3P02656 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APOC3P02656 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
APOC3P02656 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
APOC3P02656 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 AC007375.3-201ENST00000600936 2314 ntBASIC19.14■□□□□ 0.65
APOC3P02656 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOC3P02656 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOC3P02656 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
APOC3P02656 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.13■□□□□ 0.65
APOC3P02656 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOC3P02656 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOC3P02656 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
APOC3P02656 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.13■□□□□ 0.65
APOC3P02656 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.12■□□□□ 0.65
APOC3P02656 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC3P02656 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
APOC3P02656 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.12■□□□□ 0.65
APOC3P02656 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.12■□□□□ 0.65
APOC3P02656 AC233723.2-201ENST00000623798 2106 ntBASIC19.12■□□□□ 0.65
APOC3P02656 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC3P02656 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC3P02656 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC3P02656 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.12■□□□□ 0.65
APOC3P02656 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC3P02656 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
APOC3P02656 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC3P02656 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
APOC3P02656 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOC3P02656 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
APOC3P02656 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOC3P02656 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOC3P02656 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOC3P02656 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
APOC3P02656 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
APOC3P02656 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOC3P02656 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOC3P02656 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOC3P02656 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
APOC3P02656 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
APOC3P02656 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
APOC3P02656 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
APOC3P02656 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
APOC3P02656 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
APOC3P02656 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
APOC3P02656 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
APOC3P02656 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms