Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TOMM40O96008 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TOMM40O96008 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TOMM40O96008 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TOMM40O96008 AL139125.2-201ENST00000623134 1869 ntBASIC18.48■□□□□ 0.55
TOMM40O96008 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TOMM40O96008 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
TOMM40O96008 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.48■□□□□ 0.55
TOMM40O96008 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.48■□□□□ 0.55
TOMM40O96008 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOMM40O96008 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOMM40O96008 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TOMM40O96008 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TOMM40O96008 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TOMM40O96008 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.47■□□□□ 0.55
TOMM40O96008 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOMM40O96008 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TOMM40O96008 SMPD5-203ENST00000639008 1464 ntBASIC18.47■□□□□ 0.55
TOMM40O96008 MIR639-201ENST00000384974 98 ntBASIC18.47■□□□□ 0.55
TOMM40O96008 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TOMM40O96008 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TOMM40O96008 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOMM40O96008 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOMM40O96008 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOMM40O96008 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOMM40O96008 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TOMM40O96008 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.46■□□□□ 0.55
TOMM40O96008 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOMM40O96008 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOMM40O96008 AP003733.4-201ENST00000623785 1697 ntBASIC18.46■□□□□ 0.55
TOMM40O96008 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOMM40O96008 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.46■□□□□ 0.55
TOMM40O96008 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.46■□□□□ 0.55
TOMM40O96008 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOMM40O96008 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.45■□□□□ 0.54
TOMM40O96008 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.45■□□□□ 0.54
TOMM40O96008 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOMM40O96008 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.45■□□□□ 0.54
TOMM40O96008 AC092296.2-201ENST00000589470 999 ntBASIC18.45■□□□□ 0.54
TOMM40O96008 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOMM40O96008 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOMM40O96008 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.45■□□□□ 0.54
TOMM40O96008 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOMM40O96008 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOMM40O96008 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOMM40O96008 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TOMM40O96008 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TOMM40O96008 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.44■□□□□ 0.54
TOMM40O96008 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TOMM40O96008 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOMM40O96008 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TOMM40O96008 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TOMM40O96008 SLC6A10P-202ENST00000431994 2058 ntBASIC18.43■□□□□ 0.54
TOMM40O96008 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.43■□□□□ 0.54
TOMM40O96008 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.43■□□□□ 0.54
TOMM40O96008 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOMM40O96008 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOMM40O96008 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOMM40O96008 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOMM40O96008 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOMM40O96008 CLDN5-201ENST00000403084 2357 ntBASIC18.42■□□□□ 0.54
TOMM40O96008 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TOMM40O96008 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TOMM40O96008 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 ECEL1P2-201ENST00000461596 1295 ntBASIC18.42■□□□□ 0.54
TOMM40O96008 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.42■□□□□ 0.54
TOMM40O96008 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOMM40O96008 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOMM40O96008 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOMM40O96008 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.4■□□□□ 0.54
TOMM40O96008 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.4■□□□□ 0.54
TOMM40O96008 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOMM40O96008 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOMM40O96008 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOMM40O96008 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.4■□□□□ 0.54
TOMM40O96008 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TOMM40O96008 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOMM40O96008 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOMM40O96008 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOMM40O96008 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.39■□□□□ 0.53
TOMM40O96008 RP9P-202ENST00000450133 1212 ntBASIC18.39■□□□□ 0.53
TOMM40O96008 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.39■□□□□ 0.53
TOMM40O96008 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.39■□□□□ 0.53
TOMM40O96008 AC022413.1-201ENST00000624602 984 ntBASIC18.39■□□□□ 0.53
TOMM40O96008 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.39■□□□□ 0.53
TOMM40O96008 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOMM40O96008 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms