Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CUBNO60494 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CUBNO60494 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CUBNO60494 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.29■□□□□ 0.68
CUBNO60494 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CUBNO60494 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CUBNO60494 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CUBNO60494 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CUBNO60494 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 AC142381.2-201ENST00000566120 298 ntBASIC19.28■□□□□ 0.68
CUBNO60494 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.28■□□□□ 0.68
CUBNO60494 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUBNO60494 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CUBNO60494 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CUBNO60494 AC097381.1-201ENST00000429019 1296 ntBASIC19.27■□□□□ 0.68
CUBNO60494 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.27■□□□□ 0.68
CUBNO60494 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CUBNO60494 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.67
CUBNO60494 AL162430.1-201ENST00000480705 870 ntBASIC19.27■□□□□ 0.67
CUBNO60494 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CUBNO60494 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.27■□□□□ 0.67
CUBNO60494 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CUBNO60494 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CUBNO60494 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.26■□□□□ 0.67
CUBNO60494 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CUBNO60494 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.26■□□□□ 0.67
CUBNO60494 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CUBNO60494 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.25■□□□□ 0.67
CUBNO60494 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.25■□□□□ 0.67
CUBNO60494 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.25■□□□□ 0.67
CUBNO60494 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CUBNO60494 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CUBNO60494 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CUBNO60494 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.25■□□□□ 0.67
CUBNO60494 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CUBNO60494 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CUBNO60494 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.24■□□□□ 0.67
CUBNO60494 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CUBNO60494 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.24■□□□□ 0.67
CUBNO60494 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.24■□□□□ 0.67
CUBNO60494 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.24■□□□□ 0.67
CUBNO60494 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CUBNO60494 AF131216.4-201ENST00000638924 1588 ntBASIC19.24■□□□□ 0.67
CUBNO60494 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CUBNO60494 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.24■□□□□ 0.67
CUBNO60494 AL355001.2-201ENST00000620617 1191 ntBASIC19.24■□□□□ 0.67
CUBNO60494 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.24■□□□□ 0.67
CUBNO60494 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CUBNO60494 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CUBNO60494 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CUBNO60494 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CUBNO60494 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CUBNO60494 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CUBNO60494 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CUBNO60494 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CUBNO60494 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CUBNO60494 PBX2P1-201ENST00000493219 1291 ntBASIC19.23■□□□□ 0.67
CUBNO60494 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CUBNO60494 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CUBNO60494 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CUBNO60494 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CUBNO60494 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CUBNO60494 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CUBNO60494 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.22■□□□□ 0.67
CUBNO60494 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CUBNO60494 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CUBNO60494 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CUBNO60494 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.21■□□□□ 0.67
CUBNO60494 MTDHP2-201ENST00000601468 714 ntBASIC19.21■□□□□ 0.67
CUBNO60494 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CUBNO60494 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.21■□□□□ 0.67
CUBNO60494 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CUBNO60494 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CUBNO60494 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CUBNO60494 UNC93B3-201ENST00000308076 687 ntBASIC19.21■□□□□ 0.67
CUBNO60494 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CUBNO60494 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.21■□□□□ 0.67
CUBNO60494 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CUBNO60494 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CUBNO60494 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CUBNO60494 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CUBNO60494 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CUBNO60494 AC087623.3-201ENST00000607047 1098 ntBASIC19.19■□□□□ 0.66
CUBNO60494 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CUBNO60494 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CUBNO60494 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CUBNO60494 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CUBNO60494 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CUBNO60494 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CUBNO60494 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
CUBNO60494 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUBNO60494 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
CUBNO60494 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CUBNO60494 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms