Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP2O43734 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAF3IP2O43734 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP2O43734 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAF3IP2O43734 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAF3IP2O43734 SLC6A10P-202ENST00000431994 2058 ntBASIC21.16■□□□□ 0.98
TRAF3IP2O43734 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRAF3IP2O43734 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRAF3IP2O43734 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP2O43734 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP2O43734 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.15■□□□□ 0.98
TRAF3IP2O43734 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP2O43734 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAF3IP2O43734 AC022211.4-201ENST00000625094 2161 ntBASIC21.14■□□□□ 0.98
TRAF3IP2O43734 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRAF3IP2O43734 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.14■□□□□ 0.97
TRAF3IP2O43734 RPS2P7-201ENST00000447334 885 ntBASIC21.14■□□□□ 0.97
TRAF3IP2O43734 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.14■□□□□ 0.97
TRAF3IP2O43734 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAF3IP2O43734 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.14■□□□□ 0.97
TRAF3IP2O43734 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAF3IP2O43734 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAF3IP2O43734 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAF3IP2O43734 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.12■□□□□ 0.97
TRAF3IP2O43734 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP2O43734 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
TRAF3IP2O43734 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP2O43734 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP2O43734 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAF3IP2O43734 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRAF3IP2O43734 AC142381.3-201ENST00000568208 1670 ntBASIC21.12■□□□□ 0.97
TRAF3IP2O43734 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP2O43734 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP2O43734 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP2O43734 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP2O43734 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAF3IP2O43734 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP2O43734 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TRAF3IP2O43734 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAF3IP2O43734 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 AC087393.1-201ENST00000582896 145 ntBASIC21.09■□□□□ 0.97
TRAF3IP2O43734 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAF3IP2O43734 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.08■□□□□ 0.97
TRAF3IP2O43734 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAF3IP2O43734 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAF3IP2O43734 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAF3IP2O43734 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.08■□□□□ 0.97
TRAF3IP2O43734 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.08■□□□□ 0.97
TRAF3IP2O43734 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRAF3IP2O43734 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAF3IP2O43734 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAF3IP2O43734 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAF3IP2O43734 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAF3IP2O43734 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAF3IP2O43734 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TRAF3IP2O43734 AC138932.3-201ENST00000567634 1902 ntBASIC21.06■□□□□ 0.96
TRAF3IP2O43734 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAF3IP2O43734 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms