Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.86■□□□□ 0.93
SGCEO43556 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SGCEO43556 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.86■□□□□ 0.93
SGCEO43556 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SGCEO43556 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SGCEO43556 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.85■□□□□ 0.93
SGCEO43556 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.85■□□□□ 0.93
SGCEO43556 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
SGCEO43556 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SGCEO43556 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SGCEO43556 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SGCEO43556 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SGCEO43556 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SGCEO43556 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SGCEO43556 KRT18P10-201ENST00000388836 1287 ntBASIC20.83■□□□□ 0.93
SGCEO43556 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SGCEO43556 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SGCEO43556 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SGCEO43556 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.82■□□□□ 0.92
SGCEO43556 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGCEO43556 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.82■□□□□ 0.92
SGCEO43556 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SGCEO43556 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
SGCEO43556 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SGCEO43556 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.82■□□□□ 0.92
SGCEO43556 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.82■□□□□ 0.92
SGCEO43556 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.82■□□□□ 0.92
SGCEO43556 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SGCEO43556 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SGCEO43556 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.81■□□□□ 0.92
SGCEO43556 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SGCEO43556 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SGCEO43556 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SGCEO43556 AL592293.1-201ENST00000502889 1188 ntBASIC20.81■□□□□ 0.92
SGCEO43556 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
SGCEO43556 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SGCEO43556 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SGCEO43556 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SGCEO43556 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SGCEO43556 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.8■□□□□ 0.92
SGCEO43556 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SGCEO43556 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
SGCEO43556 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.79■□□□□ 0.92
SGCEO43556 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGCEO43556 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SGCEO43556 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGCEO43556 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SGCEO43556 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SGCEO43556 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.79■□□□□ 0.92
SGCEO43556 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.79■□□□□ 0.92
SGCEO43556 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SGCEO43556 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SGCEO43556 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGCEO43556 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGCEO43556 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGCEO43556 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGCEO43556 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGCEO43556 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SGCEO43556 AC022211.4-201ENST00000625094 2161 ntBASIC20.78■□□□□ 0.92
SGCEO43556 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SGCEO43556 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SGCEO43556 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SGCEO43556 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SGCEO43556 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SGCEO43556 U85056.1-201ENST00000616429 682 ntBASIC20.77■□□□□ 0.92
SGCEO43556 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SGCEO43556 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SGCEO43556 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SGCEO43556 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SGCEO43556 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
SGCEO43556 ABHD17AP5-201ENST00000580133 923 ntBASIC20.76■□□□□ 0.91
SGCEO43556 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.76■□□□□ 0.91
SGCEO43556 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SGCEO43556 AC142381.3-201ENST00000568208 1670 ntBASIC20.76■□□□□ 0.91
SGCEO43556 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SGCEO43556 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SGCEO43556 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SGCEO43556 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SGCEO43556 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SGCEO43556 AC018755.3-202ENST00000596210 929 ntBASIC20.75■□□□□ 0.91
SGCEO43556 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SGCEO43556 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
SGCEO43556 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SGCEO43556 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SGCEO43556 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SGCEO43556 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SGCEO43556 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SGCEO43556 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SGCEO43556 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.74■□□□□ 0.91
SGCEO43556 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SGCEO43556 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.74■□□□□ 0.91
SGCEO43556 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SGCEO43556 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms