Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PAX4O43316 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX4O43316 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX4O43316 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX4O43316 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX4O43316 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PAX4O43316 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PAX4O43316 AC018755.3-202ENST00000596210 929 ntBASIC16.83■□□□□ 0.28
PAX4O43316 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.83■□□□□ 0.28
PAX4O43316 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PAX4O43316 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.82■□□□□ 0.28
PAX4O43316 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PAX4O43316 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.82■□□□□ 0.28
PAX4O43316 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.82■□□□□ 0.28
PAX4O43316 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAX4O43316 NTF6A-201ENST00000591175 560 ntBASIC16.82■□□□□ 0.28
PAX4O43316 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PAX4O43316 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.82■□□□□ 0.28
PAX4O43316 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAX4O43316 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PAX4O43316 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAX4O43316 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PAX4O43316 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PAX4O43316 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.81■□□□□ 0.28
PAX4O43316 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PAX4O43316 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAX4O43316 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
PAX4O43316 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PAX4O43316 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.8■□□□□ 0.28
PAX4O43316 AC096887.2-201ENST00000623443 1957 ntBASIC16.8■□□□□ 0.28
PAX4O43316 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAX4O43316 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAX4O43316 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.8■□□□□ 0.28
PAX4O43316 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAX4O43316 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PAX4O43316 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PAX4O43316 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAX4O43316 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PAX4O43316 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PAX4O43316 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAX4O43316 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PAX4O43316 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PAX4O43316 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PAX4O43316 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.78■□□□□ 0.28
PAX4O43316 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PAX4O43316 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PAX4O43316 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.78■□□□□ 0.28
PAX4O43316 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAX4O43316 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAX4O43316 KRT18P60-201ENST00000312876 1297 ntBASIC16.77■□□□□ 0.28
PAX4O43316 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.77■□□□□ 0.28
PAX4O43316 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAX4O43316 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PAX4O43316 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PAX4O43316 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PAX4O43316 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PAX4O43316 AC097639.1-201ENST00000565519 1891 ntBASIC16.77■□□□□ 0.27
PAX4O43316 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PAX4O43316 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PAX4O43316 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PAX4O43316 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PAX4O43316 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAX4O43316 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAX4O43316 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAX4O43316 MIR6765-201ENST00000614092 87 ntBASIC16.76■□□□□ 0.27
PAX4O43316 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PAX4O43316 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAX4O43316 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAX4O43316 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAX4O43316 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.75■□□□□ 0.27
PAX4O43316 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAX4O43316 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PAX4O43316 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAX4O43316 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PAX4O43316 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.75■□□□□ 0.27
PAX4O43316 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PAX4O43316 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PAX4O43316 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PAX4O43316 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAX4O43316 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PAX4O43316 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAX4O43316 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAX4O43316 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.74■□□□□ 0.27
PAX4O43316 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PAX4O43316 DUX4L9-201ENST00000449051 1259 ntBASIC16.74■□□□□ 0.27
PAX4O43316 AC129492.7-201ENST00000622992 756 ntBASIC16.74■□□□□ 0.27
PAX4O43316 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PAX4O43316 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PAX4O43316 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PAX4O43316 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAX4O43316 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PAX4O43316 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PAX4O43316 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms