Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATP2A1O14983 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATP2A1O14983 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATP2A1O14983 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.4■■□□□ 1.98
ATP2A1O14983 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ATP2A1O14983 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
ATP2A1O14983 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
ATP2A1O14983 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ATP2A1O14983 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ATP2A1O14983 UNC93B8-201ENST00000511903 705 ntBASIC27.38■■□□□ 1.97
ATP2A1O14983 MIR4281-201ENST00000580852 62 ntBASIC27.38■■□□□ 1.97
ATP2A1O14983 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ATP2A1O14983 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.38■■□□□ 1.97
ATP2A1O14983 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.37■■□□□ 1.97
ATP2A1O14983 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 AC011551.1-201ENST00000614101 683 ntBASIC27.37■■□□□ 1.97
ATP2A1O14983 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
ATP2A1O14983 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ATP2A1O14983 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP2A1O14983 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.36■■□□□ 1.97
ATP2A1O14983 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
ATP2A1O14983 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATP2A1O14983 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.36■■□□□ 1.97
ATP2A1O14983 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.36■■□□□ 1.97
ATP2A1O14983 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ATP2A1O14983 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.35■■□□□ 1.97
ATP2A1O14983 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.34■■□□□ 1.97
ATP2A1O14983 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.34■■□□□ 1.97
ATP2A1O14983 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP2A1O14983 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.34■■□□□ 1.97
ATP2A1O14983 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.34■■□□□ 1.97
ATP2A1O14983 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
ATP2A1O14983 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ATP2A1O14983 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATP2A1O14983 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.33■■□□□ 1.97
ATP2A1O14983 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.33■■□□□ 1.97
ATP2A1O14983 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.33■■□□□ 1.97
ATP2A1O14983 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.33■■□□□ 1.97
ATP2A1O14983 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ATP2A1O14983 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP2A1O14983 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP2A1O14983 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
ATP2A1O14983 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ATP2A1O14983 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.31■■□□□ 1.96
ATP2A1O14983 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.31■■□□□ 1.96
ATP2A1O14983 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
ATP2A1O14983 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ATP2A1O14983 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.3■■□□□ 1.96
ATP2A1O14983 AC092028.1-203ENST00000608262 953 ntBASIC27.3■■□□□ 1.96
ATP2A1O14983 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
ATP2A1O14983 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP2A1O14983 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.29■■□□□ 1.96
ATP2A1O14983 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.29■■□□□ 1.96
ATP2A1O14983 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
ATP2A1O14983 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATP2A1O14983 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP2A1O14983 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
ATP2A1O14983 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.28■■□□□ 1.96
ATP2A1O14983 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
ATP2A1O14983 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.28■■□□□ 1.96
ATP2A1O14983 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.28■■□□□ 1.96
ATP2A1O14983 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.28■■□□□ 1.96
ATP2A1O14983 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATP2A1O14983 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.27■■□□□ 1.96
ATP2A1O14983 KRT16P3-201ENST00000439127 1283 ntBASIC27.27■■□□□ 1.96
ATP2A1O14983 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.27■■□□□ 1.96
ATP2A1O14983 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.27■■□□□ 1.96
ATP2A1O14983 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.27■■□□□ 1.96
ATP2A1O14983 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP2A1O14983 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP2A1O14983 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ATP2A1O14983 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
ATP2A1O14983 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.26■■□□□ 1.95
ATP2A1O14983 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.26■■□□□ 1.95
ATP2A1O14983 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.26■■□□□ 1.95
ATP2A1O14983 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP2A1O14983 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATP2A1O14983 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
ATP2A1O14983 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.25■■□□□ 1.95
ATP2A1O14983 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ATP2A1O14983 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
ATP2A1O14983 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
ATP2A1O14983 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATP2A1O14983 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.24■■□□□ 1.95
ATP2A1O14983 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms