Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00473A8K010 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00473A8K010 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LINC00473A8K010 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.33■□□□□ 0.68
LINC00473A8K010 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LINC00473A8K010 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00473A8K010 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00473A8K010 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.32■□□□□ 0.68
LINC00473A8K010 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.32■□□□□ 0.68
LINC00473A8K010 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LINC00473A8K010 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.32■□□□□ 0.68
LINC00473A8K010 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00473A8K010 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00473A8K010 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00473A8K010 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00473A8K010 LINC01124-201ENST00000409786 2117 ntBASIC19.31■□□□□ 0.68
LINC00473A8K010 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.31■□□□□ 0.68
LINC00473A8K010 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LINC00473A8K010 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00473A8K010 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
LINC00473A8K010 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00473A8K010 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LINC00473A8K010 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00473A8K010 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00473A8K010 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LINC00473A8K010 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LINC00473A8K010 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00473A8K010 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00473A8K010 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00473A8K010 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC00473A8K010 RP9P-202ENST00000450133 1212 ntBASIC19.3■□□□□ 0.68
LINC00473A8K010 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.3■□□□□ 0.68
LINC00473A8K010 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00473A8K010 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LINC00473A8K010 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00473A8K010 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
LINC00473A8K010 AC093536.1-201ENST00000569153 554 ntBASIC19.29■□□□□ 0.68
LINC00473A8K010 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LINC00473A8K010 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00473A8K010 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00473A8K010 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC00473A8K010 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00473A8K010 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00473A8K010 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.28■□□□□ 0.68
LINC00473A8K010 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00473A8K010 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
LINC00473A8K010 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LINC00473A8K010 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00473A8K010 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00473A8K010 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.28■□□□□ 0.68
LINC00473A8K010 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.28■□□□□ 0.68
LINC00473A8K010 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00473A8K010 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00473A8K010 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LINC00473A8K010 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LINC00473A8K010 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00473A8K010 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00473A8K010 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00473A8K010 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00473A8K010 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC00473A8K010 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.27■□□□□ 0.67
LINC00473A8K010 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00473A8K010 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00473A8K010 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC00473A8K010 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00473A8K010 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
LINC00473A8K010 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00473A8K010 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00473A8K010 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC00473A8K010 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC00473A8K010 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 AC007029.1-201ENST00000604183 313 ntBASIC19.25■□□□□ 0.67
LINC00473A8K010 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LINC00473A8K010 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC00473A8K010 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.25■□□□□ 0.67
LINC00473A8K010 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC00473A8K010 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00473A8K010 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.25■□□□□ 0.67
LINC00473A8K010 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC00473A8K010 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00473A8K010 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LINC00473A8K010 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00473A8K010 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00473A8K010 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC00473A8K010 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.24■□□□□ 0.67
LINC00473A8K010 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00473A8K010 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00473A8K010 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
LINC00473A8K010 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.23■□□□□ 0.67
LINC00473A8K010 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms