Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC012676.1-201ENST00000574705 1949 ntBASIC20.19■□□□□ 0.82
TMEM235A6NFC5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM235A6NFC5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM235A6NFC5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM235A6NFC5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
TMEM235A6NFC5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 AC068473.5-201ENST00000616428 2072 ntBASIC20.16■□□□□ 0.82
TMEM235A6NFC5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM235A6NFC5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM235A6NFC5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM235A6NFC5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.13■□□□□ 0.81
TMEM235A6NFC5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM235A6NFC5 AC141586.4-201ENST00000624558 1573 ntBASIC20.12■□□□□ 0.81
TMEM235A6NFC5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 HLA-V-202ENST00000446817 847 ntBASIC20.12■□□□□ 0.81
TMEM235A6NFC5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TMEM235A6NFC5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM235A6NFC5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM235A6NFC5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms