Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
LAMB4A4D0S4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
LAMB4A4D0S4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
LAMB4A4D0S4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
LAMB4A4D0S4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.55■■■□□ 2.48
LAMB4A4D0S4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
LAMB4A4D0S4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LAMB4A4D0S4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
LAMB4A4D0S4 AC096887.2-201ENST00000623443 1957 ntBASIC30.54■■■□□ 2.48
LAMB4A4D0S4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
LAMB4A4D0S4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.52■■■□□ 2.48
LAMB4A4D0S4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LAMB4A4D0S4 AL592295.1-201ENST00000400984 884 ntBASIC30.52■■■□□ 2.48
LAMB4A4D0S4 KRT125P-201ENST00000546827 989 ntBASIC30.52■■■□□ 2.48
LAMB4A4D0S4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.52■■■□□ 2.48
LAMB4A4D0S4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.52■■■□□ 2.48
LAMB4A4D0S4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
LAMB4A4D0S4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
LAMB4A4D0S4 AC021242.3-201ENST00000607598 1377 ntBASIC30.51■■■□□ 2.47
LAMB4A4D0S4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
LAMB4A4D0S4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
LAMB4A4D0S4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LAMB4A4D0S4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.48■■■□□ 2.47
LAMB4A4D0S4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.48■■■□□ 2.47
LAMB4A4D0S4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LAMB4A4D0S4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
LAMB4A4D0S4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.47■■■□□ 2.47
LAMB4A4D0S4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
LAMB4A4D0S4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.47■■■□□ 2.47
LAMB4A4D0S4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
LAMB4A4D0S4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB4A4D0S4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
LAMB4A4D0S4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
LAMB4A4D0S4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
LAMB4A4D0S4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LAMB4A4D0S4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.44■■■□□ 2.46
LAMB4A4D0S4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
LAMB4A4D0S4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
LAMB4A4D0S4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LAMB4A4D0S4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
LAMB4A4D0S4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
LAMB4A4D0S4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
LAMB4A4D0S4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
LAMB4A4D0S4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.41■■■□□ 2.46
LAMB4A4D0S4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC30.41■■■□□ 2.46
LAMB4A4D0S4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.41■■■□□ 2.46
LAMB4A4D0S4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LAMB4A4D0S4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LAMB4A4D0S4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.4■■■□□ 2.46
LAMB4A4D0S4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.4■■■□□ 2.46
LAMB4A4D0S4 ERN1-208ENST00000606895 2068 ntBASIC30.4■■■□□ 2.46
LAMB4A4D0S4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.39■■■□□ 2.46
LAMB4A4D0S4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LAMB4A4D0S4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.39■■■□□ 2.46
LAMB4A4D0S4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LAMB4A4D0S4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.38■■■□□ 2.45
LAMB4A4D0S4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LAMB4A4D0S4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LAMB4A4D0S4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.38■■■□□ 2.45
LAMB4A4D0S4 AC131281.2-201ENST00000520478 145 ntBASIC30.38■■■□□ 2.45
LAMB4A4D0S4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LAMB4A4D0S4 AC010501.1-201ENST00000606270 1962 ntBASIC30.37■■■□□ 2.45
LAMB4A4D0S4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.37■■■□□ 2.45
LAMB4A4D0S4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.37■■■□□ 2.45
LAMB4A4D0S4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.37■■■□□ 2.45
LAMB4A4D0S4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LAMB4A4D0S4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LAMB4A4D0S4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.36■■■□□ 2.45
LAMB4A4D0S4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
LAMB4A4D0S4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB4A4D0S4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB4A4D0S4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB4A4D0S4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms