Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CLRN2A0PK11 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CLRN2A0PK11 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.52■■■□□ 2.16
CLRN2A0PK11 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.52■■■□□ 2.16
CLRN2A0PK11 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.52■■■□□ 2.16
CLRN2A0PK11 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.52■■■□□ 2.16
CLRN2A0PK11 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CLRN2A0PK11 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
CLRN2A0PK11 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CLRN2A0PK11 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CLRN2A0PK11 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.51■■■□□ 2.15
CLRN2A0PK11 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CLRN2A0PK11 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
CLRN2A0PK11 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CLRN2A0PK11 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CLRN2A0PK11 AC010997.5-201ENST00000609182 354 ntBASIC28.5■■■□□ 2.15
CLRN2A0PK11 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
CLRN2A0PK11 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CLRN2A0PK11 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CLRN2A0PK11 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
CLRN2A0PK11 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CLRN2A0PK11 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CLRN2A0PK11 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CLRN2A0PK11 AL117332.1-201ENST00000622628 974 ntBASIC28.49■■■□□ 2.15
CLRN2A0PK11 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CLRN2A0PK11 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
CLRN2A0PK11 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CLRN2A0PK11 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CLRN2A0PK11 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CLRN2A0PK11 AL136116.3-201ENST00000402907 1138 ntBASIC28.48■■■□□ 2.15
CLRN2A0PK11 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.48■■■□□ 2.15
CLRN2A0PK11 AL139246.5-201ENST00000606645 996 ntBASIC28.48■■■□□ 2.15
CLRN2A0PK11 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.48■■■□□ 2.15
CLRN2A0PK11 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CLRN2A0PK11 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
CLRN2A0PK11 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.47■■■□□ 2.15
CLRN2A0PK11 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
CLRN2A0PK11 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.46■■■□□ 2.15
CLRN2A0PK11 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.46■■■□□ 2.15
CLRN2A0PK11 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CLRN2A0PK11 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.46■■■□□ 2.15
CLRN2A0PK11 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.46■■■□□ 2.15
CLRN2A0PK11 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.46■■■□□ 2.15
CLRN2A0PK11 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
CLRN2A0PK11 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.46■■■□□ 2.15
CLRN2A0PK11 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CLRN2A0PK11 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.45■■■□□ 2.15
CLRN2A0PK11 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
CLRN2A0PK11 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CLRN2A0PK11 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CLRN2A0PK11 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.44■■■□□ 2.14
CLRN2A0PK11 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
CLRN2A0PK11 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.44■■■□□ 2.14
CLRN2A0PK11 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.44■■■□□ 2.14
CLRN2A0PK11 MTDHP2-201ENST00000601468 714 ntBASIC28.44■■■□□ 2.14
CLRN2A0PK11 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.44■■■□□ 2.14
CLRN2A0PK11 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC28.44■■■□□ 2.14
CLRN2A0PK11 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
CLRN2A0PK11 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CLRN2A0PK11 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.43■■■□□ 2.14
CLRN2A0PK11 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
CLRN2A0PK11 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CLRN2A0PK11 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CLRN2A0PK11 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.43■■■□□ 2.14
CLRN2A0PK11 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CLRN2A0PK11 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.42■■■□□ 2.14
CLRN2A0PK11 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
CLRN2A0PK11 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.42■■■□□ 2.14
CLRN2A0PK11 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC28.42■■■□□ 2.14
CLRN2A0PK11 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.42■■■□□ 2.14
CLRN2A0PK11 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CLRN2A0PK11 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CLRN2A0PK11 MIR3621-201ENST00000580529 85 ntBASIC28.41■■■□□ 2.14
CLRN2A0PK11 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CLRN2A0PK11 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.41■■■□□ 2.14
CLRN2A0PK11 MIR6724-1-201ENST00000616420 92 ntBASIC28.41■■■□□ 2.14
CLRN2A0PK11 MIR6724-2-201ENST00000616483 92 ntBASIC28.41■■■□□ 2.14
CLRN2A0PK11 MIR6724-4-201ENST00000617390 92 ntBASIC28.41■■■□□ 2.14
CLRN2A0PK11 MIR6724-3-201ENST00000622482 92 ntBASIC28.41■■■□□ 2.14
CLRN2A0PK11 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
CLRN2A0PK11 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CLRN2A0PK11 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.4■■■□□ 2.14
CLRN2A0PK11 AC011551.1-201ENST00000614101 683 ntBASIC28.4■■■□□ 2.14
CLRN2A0PK11 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CLRN2A0PK11 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CLRN2A0PK11 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
CLRN2A0PK11 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.39■■■□□ 2.14
CLRN2A0PK11 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.39■■■□□ 2.14
CLRN2A0PK11 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
CLRN2A0PK11 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.38■■■□□ 2.13
CLRN2A0PK11 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CLRN2A0PK11 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.38■■■□□ 2.13
CLRN2A0PK11 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CLRN2A0PK11 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.38■■■□□ 2.13
CLRN2A0PK11 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CLRN2A0PK11 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.38■■■□□ 2.13
CLRN2A0PK11 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CLRN2A0PK11 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CLRN2A0PK11 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.37■■■□□ 2.13
CLRN2A0PK11 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms