Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHISA3A0PJX4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.75■□□□□ 0.91
SHISA3A0PJX4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHISA3A0PJX4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.73■□□□□ 0.91
SHISA3A0PJX4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 CLDN5-201ENST00000403084 2357 ntBASIC20.73■□□□□ 0.91
SHISA3A0PJX4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SHISA3A0PJX4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHISA3A0PJX4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SHISA3A0PJX4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHISA3A0PJX4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHISA3A0PJX4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHISA3A0PJX4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 MIR219A2-201ENST00000608502 1504 ntBASIC20.71■□□□□ 0.91
SHISA3A0PJX4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHISA3A0PJX4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 AP006261.1-201ENST00000584783 668 ntBASIC20.7■□□□□ 0.9
SHISA3A0PJX4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHISA3A0PJX4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA3A0PJX4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SHISA3A0PJX4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA3A0PJX4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA3A0PJX4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA3A0PJX4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA3A0PJX4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHISA3A0PJX4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 AL359258.2-201ENST00000564063 1566 ntBASIC20.68■□□□□ 0.9
SHISA3A0PJX4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHISA3A0PJX4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHISA3A0PJX4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
SHISA3A0PJX4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms