Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TCRBV9S1A1TA0A576 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV9S1A1TA0A576 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV9S1A1TA0A576 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.93■■□□□ 1.42
TCRBV9S1A1TA0A576 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV9S1A1TA0A576 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV9S1A1TA0A576 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV9S1A1TA0A576 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TCRBV9S1A1TA0A576 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TCRBV9S1A1TA0A576 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 AC060814.1-201ENST00000554326 538 ntBASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TCRBV9S1A1TA0A576 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TCRBV9S1A1TA0A576 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 LINC00543-201ENST00000567234 1845 ntBASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TCRBV9S1A1TA0A576 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
TCRBV9S1A1TA0A576 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
TCRBV9S1A1TA0A576 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.89■■□□□ 1.41
TCRBV9S1A1TA0A576 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.88■■□□□ 1.41
TCRBV9S1A1TA0A576 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV9S1A1TA0A576 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV9S1A1TA0A576 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.88■■□□□ 1.41
TCRBV9S1A1TA0A576 MIR3960-201ENST00000583311 91 ntBASIC23.88■■□□□ 1.41
TCRBV9S1A1TA0A576 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.88■■□□□ 1.41
TCRBV9S1A1TA0A576 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TCRBV9S1A1TA0A576 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV9S1A1TA0A576 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV9S1A1TA0A576 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TCRBV9S1A1TA0A576 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV9S1A1TA0A576 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TCRBV9S1A1TA0A576 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TCRBV9S1A1TA0A576 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TCRBV9S1A1TA0A576 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TCRBV9S1A1TA0A576 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 SMPD5-203ENST00000639008 1464 ntBASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
TCRBV9S1A1TA0A576 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV9S1A1TA0A576 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TCRBV9S1A1TA0A576 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
TCRBV9S1A1TA0A576 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.83■■□□□ 1.41
TCRBV9S1A1TA0A576 AC092296.2-201ENST00000589470 999 ntBASIC23.83■■□□□ 1.41
TCRBV9S1A1TA0A576 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TCRBV9S1A1TA0A576 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms