Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RNF103-CHMP3A0A140T963 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF103-CHMP3A0A140T963 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF103-CHMP3A0A140T963 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF103-CHMP3A0A140T963 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RNF103-CHMP3A0A140T963 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF103-CHMP3A0A140T963 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF103-CHMP3A0A140T963 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF103-CHMP3A0A140T963 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.64■■□□□ 1.22
RNF103-CHMP3A0A140T963 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 AL157400.5-201ENST00000507624 621 ntBASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.64■■□□□ 1.21
RNF103-CHMP3A0A140T963 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF103-CHMP3A0A140T963 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 AC060814.1-201ENST00000554326 538 ntBASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.62■■□□□ 1.21
RNF103-CHMP3A0A140T963 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF103-CHMP3A0A140T963 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF103-CHMP3A0A140T963 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF103-CHMP3A0A140T963 MIR639-201ENST00000384974 98 ntBASIC22.61■■□□□ 1.21
RNF103-CHMP3A0A140T963 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.61■■□□□ 1.21
RNF103-CHMP3A0A140T963 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF103-CHMP3A0A140T963 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF103-CHMP3A0A140T963 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF103-CHMP3A0A140T963 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF103-CHMP3A0A140T963 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF103-CHMP3A0A140T963 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF103-CHMP3A0A140T963 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF103-CHMP3A0A140T963 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.58■■□□□ 1.2
RNF103-CHMP3A0A140T963 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF103-CHMP3A0A140T963 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF103-CHMP3A0A140T963 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 AC012676.1-201ENST00000574705 1949 ntBASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF103-CHMP3A0A140T963 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF103-CHMP3A0A140T963 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF103-CHMP3A0A140T963 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms