Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 AL592295.1-201ENST00000400984 884 ntBASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
CENPVL3A0A0U1RRI6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.33■□□□□ 0.69
CENPVL3A0A0U1RRI6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CENPVL3A0A0U1RRI6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CENPVL3A0A0U1RRI6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.33■□□□□ 0.68
CENPVL3A0A0U1RRI6 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.33■□□□□ 0.68
CENPVL3A0A0U1RRI6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.33■□□□□ 0.68
CENPVL3A0A0U1RRI6 THA1P-201ENST00000590384 1145 ntBASIC19.33■□□□□ 0.68
CENPVL3A0A0U1RRI6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CENPVL3A0A0U1RRI6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.32■□□□□ 0.68
CENPVL3A0A0U1RRI6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPVL3A0A0U1RRI6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPVL3A0A0U1RRI6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CENPVL3A0A0U1RRI6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CENPVL3A0A0U1RRI6 AC120024.1-201ENST00000562672 995 ntBASIC19.31■□□□□ 0.68
CENPVL3A0A0U1RRI6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.31■□□□□ 0.68
CENPVL3A0A0U1RRI6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CENPVL3A0A0U1RRI6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 AC096887.2-201ENST00000623443 1957 ntBASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 AC239859.2-201ENST00000444165 318 ntBASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CENPVL3A0A0U1RRI6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CENPVL3A0A0U1RRI6 GUSBP5-201ENST00000418136 578 ntBASIC19.29■□□□□ 0.68
CENPVL3A0A0U1RRI6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.29■□□□□ 0.68
CENPVL3A0A0U1RRI6 Z92544.1-202ENST00000571933 1220 ntBASIC19.29■□□□□ 0.68
CENPVL3A0A0U1RRI6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.29■□□□□ 0.68
CENPVL3A0A0U1RRI6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.29■□□□□ 0.68
CENPVL3A0A0U1RRI6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
CENPVL3A0A0U1RRI6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 AC010501.1-201ENST00000606270 1962 ntBASIC19.28■□□□□ 0.68
CENPVL3A0A0U1RRI6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPVL3A0A0U1RRI6 AC092803.2-201ENST00000564287 1899 ntBASIC19.27■□□□□ 0.68
CENPVL3A0A0U1RRI6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CENPVL3A0A0U1RRI6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPVL3A0A0U1RRI6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPVL3A0A0U1RRI6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CENPVL3A0A0U1RRI6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CENPVL3A0A0U1RRI6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.27■□□□□ 0.67
CENPVL3A0A0U1RRI6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CENPVL3A0A0U1RRI6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CENPVL3A0A0U1RRI6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 AC097639.1-201ENST00000565519 1891 ntBASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 BX664725.1-201ENST00000438252 379 ntBASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CENPVL3A0A0U1RRI6 FOXO3B-201ENST00000395675 1928 ntBASIC19.24■□□□□ 0.67
CENPVL3A0A0U1RRI6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CENPVL3A0A0U1RRI6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPVL3A0A0U1RRI6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CENPVL3A0A0U1RRI6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CENPVL3A0A0U1RRI6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CENPVL3A0A0U1RRI6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPVL3A0A0U1RRI6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPVL3A0A0U1RRI6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPVL3A0A0U1RRI6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CENPVL3A0A0U1RRI6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms