Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV27A0A0K0K1C4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV27A0A0K0K1C4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV27A0A0K0K1C4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV27A0A0K0K1C4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.77■□□□□ 0.27
TRBV27A0A0K0K1C4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRBV27A0A0K0K1C4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV27A0A0K0K1C4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 DUSP8P5-201ENST00000422884 1815 ntBASIC16.75■□□□□ 0.27
TRBV27A0A0K0K1C4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV27A0A0K0K1C4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV27A0A0K0K1C4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV27A0A0K0K1C4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV27A0A0K0K1C4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TRBV27A0A0K0K1C4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV27A0A0K0K1C4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRBV27A0A0K0K1C4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV27A0A0K0K1C4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV27A0A0K0K1C4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV27A0A0K0K1C4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV27A0A0K0K1C4 AC004812.2-201ENST00000611079 2094 ntBASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 AC126177.7-201ENST00000547904 679 ntBASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV27A0A0K0K1C4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms