Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV21A0A0B4J279 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 LINC01124-201ENST00000409786 2117 ntBASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 ABHD17AP4-201ENST00000411545 909 ntBASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 SLC6A10P-202ENST00000431994 2058 ntBASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV21A0A0B4J279 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV21A0A0B4J279 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV21A0A0B4J279 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV21A0A0B4J279 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV21A0A0B4J279 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV21A0A0B4J279 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV21A0A0B4J279 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV21A0A0B4J279 MIR3960-201ENST00000583311 91 ntBASIC17.52■□□□□ 0.4
TRAV21A0A0B4J279 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRAV21A0A0B4J279 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV21A0A0B4J279 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TRAV21A0A0B4J279 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 AC016575.1-201ENST00000607026 382 ntBASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV21A0A0B4J279 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV21A0A0B4J279 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV21A0A0B4J279 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV21A0A0B4J279 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV21A0A0B4J279 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV21A0A0B4J279 AC025884.2-201ENST00000553429 711 ntBASIC17.48■□□□□ 0.39
TRAV21A0A0B4J279 AC141586.4-201ENST00000624558 1573 ntBASIC17.48■□□□□ 0.39
TRAV21A0A0B4J279 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 AL157400.5-201ENST00000507624 621 ntBASIC17.47■□□□□ 0.39
TRAV21A0A0B4J279 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms