Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-1A0A0B4J245 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-1A0A0B4J245 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-1A0A0B4J245 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-1A0A0B4J245 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV12-1A0A0B4J245 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV12-1A0A0B4J245 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV12-1A0A0B4J245 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 AL391121.1-201ENST00000607967 1349 ntBASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV12-1A0A0B4J245 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV12-1A0A0B4J245 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV12-1A0A0B4J245 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 SLC6A10P-202ENST00000431994 2058 ntBASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 AC004812.2-201ENST00000611079 2094 ntBASIC16.6■□□□□ 0.25
TRAV12-1A0A0B4J245 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV12-1A0A0B4J245 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV12-1A0A0B4J245 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV12-1A0A0B4J245 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 AC110285.7-201ENST00000624417 1536 ntBASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-1A0A0B4J245 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 AC108673.1-201ENST00000510422 1159 ntBASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 SETD8P1-201ENST00000623146 1180 ntBASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-1A0A0B4J245 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 C9orf163-202ENST00000624034 2573 ntBASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-1A0A0B4J245 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms