Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6724-1-201ENST00000616420 92 ntBASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6724-2-201ENST00000616483 92 ntBASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6724-4-201ENST00000617390 92 ntBASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 MIR6724-3-201ENST00000622482 92 ntBASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.72■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 MIR3621-201ENST00000580529 85 ntBASIC23.72■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.72■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.71■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.71■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.71■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.71■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.7■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
MSANTD3-TMEFF1A0A0A6YYJ0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 AL356740.2-201ENST00000601559 647 ntBASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 AC110285.6-201ENST00000617652 491 ntBASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.69■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.69■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.67■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.67■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 AC096631.2-201ENST00000436136 790 ntBASIC23.67■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.67■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 MIR4466-201ENST00000606121 54 ntBASIC23.67■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.65■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.65■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 AC011551.1-201ENST00000614101 683 ntBASIC23.65■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.65■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MSANTD3-TMEFF1A0A0A6YYJ0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.64■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.64■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 AC005837.3-201ENST00000612163 286 ntBASIC23.64■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.63■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.63■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.61■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.6■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.58■■□□□ 1.37
MSANTD3-TMEFF1A0A0A6YYJ0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
MSANTD3-TMEFF1A0A0A6YYJ0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms