Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 DBET-201ENST00000630918 3363 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 AC023824.1-201ENST00000562945 2975 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 AC097637.2-201ENST00000624096 1997 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 MYCLP1-201ENST00000372451 1075 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 AC004832.2-201ENST00000426397 482 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 MIR4751-201ENST00000578027 74 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 AP001160.2-201ENST00000596071 487 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 AL391256.1-201ENST00000443260 1855 ntBASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DDX49Q9Y6V7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 AC003669.1-201ENST00000334569 611 ntBASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 IGLL3P-201ENST00000412472 434 ntBASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 NCF1C-201ENST00000438382 1427 ntBASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX49Q9Y6V7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 AL645728.1-201ENST00000366221 2101 ntBASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 SIGLEC30P-201ENST00000455569 941 ntBASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 STK19B-204ENST00000512515 211 ntBASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 AC002347.1-201ENST00000569543 541 ntBASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
DDX49Q9Y6V7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
DDX49Q9Y6V7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms