Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 AD001527.2-201ENST00000622994 785 ntBASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 IGHV3-52-201ENST00000519770 353 ntBASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 AC008608.2-201ENST00000606089 416 ntBASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 AL355877.3-201ENST00000622820 899 ntBASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 AP000867.4-201ENST00000641616 219 ntBASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4B1Q9Y6B7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 MYCLP1-201ENST00000372451 1075 ntBASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 MTDHP3-201ENST00000594186 672 ntBASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 AL121912.1-201ENST00000603683 238 ntBASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 AP001269.4-201ENST00000609611 512 ntBASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 AP005117.1-202ENST00000581724 1908 ntBASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4B1Q9Y6B7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms