Protein–RNA interactions for Protein: Q9UPQ9

TNRC6B, Trinucleotide repeat-containing gene 6B protein, humanhuman

Known RBP Predictions only

Length 1,833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6BQ9UPQ9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNRC6BQ9UPQ9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 AC074338.1-201ENST00000416825 156 ntBASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 AC079316.1-201ENST00000548397 411 ntBASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 MSTO2P-201ENST00000314835 1709 ntBASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.71■□□□□ 0.11
TNRC6BQ9UPQ9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 AC006538.1-201ENST00000567905 1585 ntBASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 AC134915.1-201ENST00000426461 574 ntBASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 AP000812.2-201ENST00000538934 718 ntBASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 AC005252.2-201ENST00000624630 1141 ntBASIC15.71■□□□□ 0.1
TNRC6BQ9UPQ9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 AC068880.1-201ENST00000507289 2297 ntBASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 AC006033.1-201ENST00000440505 426 ntBASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 GOLGA2P4-201ENST00000441462 777 ntBASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 BCRP2-202ENST00000447763 634 ntBASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 BCRP6-201ENST00000510112 632 ntBASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 BCRP7-201ENST00000511549 544 ntBASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 AL691432.1-201ENST00000596308 1422 ntBASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.7■□□□□ 0.1
TNRC6BQ9UPQ9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.69■□□□□ 0.1
TNRC6BQ9UPQ9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNRC6BQ9UPQ9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms