Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPIPA1Q9UND3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 AC078925.2-201ENST00000624013 1973 ntBASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 FLJ38576-201ENST00000623820 2459 ntBASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 AC093214.1-201ENST00000511688 1107 ntBASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 AC109635.5-201ENST00000533593 962 ntBASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 AC087641.1-201ENST00000557561 1021 ntBASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 AL031055.1-201ENST00000606362 631 ntBASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA1Q9UND3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 WASH6P-202ENST00000359512 1437 ntBASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AC091167.2-201ENST00000579581 588 ntBASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AC015911.4-201ENST00000588022 1070 ntBASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.19■□□□□ 0.02
NPIPA1Q9UND3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms