Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC1R1Q9NWW0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
HCFC1R1Q9NWW0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HCFC1R1Q9NWW0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HCFC1R1Q9NWW0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC1R1Q9NWW0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC1R1Q9NWW0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 AC055876.2-201ENST00000531834 546 ntBASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 MIR6752-201ENST00000618442 71 ntBASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 MIR6069-201ENST00000620069 79 ntBASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 AL136982.4-201ENST00000437689 1740 ntBASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 AC090340.1-201ENST00000620778 4980 ntBASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC1R1Q9NWW0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 RNF216P1-203ENST00000404404 2427 ntBASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 AC098850.1-201ENST00000419919 790 ntBASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 CTBP2P3-201ENST00000585629 1255 ntBASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 UBALD1-205ENST00000590891 2641 ntBASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC1R1Q9NWW0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HCFC1R1Q9NWW0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms