Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 AC026979.3-201ENST00000607315 403 ntBASIC19.69■□□□□ 0.74
SALL1Q9NSC2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 SPDYE22P-201ENST00000582158 798 ntBASIC19.68■□□□□ 0.74
SALL1Q9NSC2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SALL1Q9NSC2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 KRT8P12-202ENST00000472924 1397 ntBASIC19.67■□□□□ 0.74
SALL1Q9NSC2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 AC010336.2-201ENST00000564226 506 ntBASIC19.67■□□□□ 0.74
SALL1Q9NSC2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 AC004840.1-201ENST00000636359 365 ntBASIC19.67■□□□□ 0.74
SALL1Q9NSC2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL1Q9NSC2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 BTBD7P1-201ENST00000447253 1453 ntBASIC19.66■□□□□ 0.74
SALL1Q9NSC2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 PIN1P1-201ENST00000412108 996 ntBASIC19.66■□□□□ 0.74
SALL1Q9NSC2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL1Q9NSC2 AL512361.1-201ENST00000554200 418 ntBASIC19.66■□□□□ 0.74
SALL1Q9NSC2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms